RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 ITFG2Q969R8 447 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 SAP30BPQ9UHR5 308 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 MYH6P13533 1939 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 KLF18A0A0U1RQI7 1052 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 MYO1BO43795 1136 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 RANBP6O60518 1105 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 CDK8P49336 464 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 PLCD1P51178 756 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 NCBP1Q09161 790 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ST3GAL1Q11201 340 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 PICALMQ13492 652 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 SEC23AQ15436 765 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ANKS1AQ92625 1134 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 PRMT6Q96LA8 375 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ZSCAN10Q96SZ4 725 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 PRDM16Q9HAZ2 1276 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 CWC15Q9P013 229 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 SMC3Q9UQE7 1217 aa8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ZBTB12Q9Y330 459 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-211ENST00000493660 CCDC69A6NI79 296 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 RASA1P20936 1047 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 PPP2R5BQ15173 497 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 APOA5Q6Q788 366 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 FAM83AQ86UY5 434 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 METTL16Q86W50 562 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF444Q8N0Y2 327 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 GPC2Q8N158 579 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF70Q9UC06 446 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 MYH4Q9Y623 1939 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 TNKSO95271 1327 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 KLHL33A6NCF5 533 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 TSPY2A6NKD2 308 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 GOLGA8BA8MQT2 603 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 ZBTB43O43298 467 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 CALM1P0DP23 149 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 CALM2P0DP24 149 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 CALM3P0DP25 149 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 LIG1P18858 919 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 GMPSP49915 693 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 SCRN1Q12765 414 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NFIAQ12857 509 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 C11orf91Q3C1V1 193 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NFXL1Q6ZNB6 911 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 DGKHQ86XP1 1220 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 FOXP4Q8IVH2 680 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 NEDD1Q8NHV4 660 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 FAM151AQ8WW52 585 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 FOXD4L1Q9NU39 408 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 PI4KBQ9UBF8 816 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 PCDHAC2Q9Y5I4 1007 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 MRVI1Q9Y6F6 885 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF541Q9H0D2 1346 aa8.31□□□□□ -1.08
SMARCE1-211ENST00000493660 MYH15Q9Y2K3 1946 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 MYO1CO00159 1063 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 DDAH1O94760 285 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 YBX3P16989 372 aaKnown RBP eCLIP8.3□□□□□ -1.082e-7■■□□□ 12.5
SMARCE1-211ENST00000493660 PDCP20941 246 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 EVX2Q03828 476 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 LRSAM1Q6UWE0 723 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 ENAHQ8N8S7 591 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 TMX1Q9H3N1 280 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 GPHNQ9NQX3 736 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 SCN4AP35499 1836 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 ATAD5Q96QE3 1844 aa8.3□□□□□ -1.08
SMARCE1-211ENST00000493660 PRDM1O75626 825 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CDKL5O76039 1030 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 GJB2P29033 226 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 NOVP48745 357 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TNNI2P48788 182 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TFAP4Q01664 338 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 STK3Q13188 491 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 IFIT1BQ5T764 474 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms