RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RASSF9O75901 435 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 LUC7L3O95232 432 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 SULT6B1Q6IMI4 303 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 WDR66Q8TBY9 1149 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 DTNBP1Q96EV8 351 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 DESI2Q9BSY9 194 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 ACTR5Q9H9F9 607 aaPredicted RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 NOD2Q9HC29 1040 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 GALNT8Q9NY28 637 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 COL15A1P39059 1388 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 SLIT2O94813 1529 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 ZNF646O15015 1829 aaPredicted RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 TAF1LQ8IZX4 1826 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 MYO5AQ9Y4I1 1855 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 TUBBP07437 444 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 CUL4BQ13620 913 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 PTPN21Q16825 1174 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC65Q8IXS2 484 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC170Q8IYT3 715 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 C15orf41Q9Y2V0 281 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 L3MBTL1Q9Y468 752 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 A0A1B0GVL5 298 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 E7EVH7 732 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 BIN1O00499 593 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 FOXO3O43524 673 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 ZMYND10O75800 440 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 SYF2O95926 243 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 ATP4AP20648 1035 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 PCK1P35558 622 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 HSPA2P54652 639 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 DYNC1I2Q13409 638 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 ZNF569Q5MCW4 686 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 RBM26Q5T8P6 1007 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 Q6ZUG5 572 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 SEC62Q99442 399 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 DISP2A7MBM2 1401 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 LSM1O15116 133 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 SLMAPQ14BN4 828 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 PPP1R15BQ5SWA1 713 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 ELOA2Q8IYF1 753 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 OGFOD1Q8N543 542 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 IL17REQ8NFR9 667 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 SMCR8Q8TEV9 937 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
VPS13B-205ENST00000493587 KCND1Q9NSA2 647 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 CDC23Q9UJX2 597 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 MTMR6Q9Y217 621 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 C2CD2Q9Y426 696 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 LY75O60449 1722 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 TNS3Q68CZ2 1445 aa7.67□□□□□ -1.18
VPS13B-205ENST00000493587 MBD4O95243 580 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 VIL1P09327 827 aaKnown RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 MCM3P25205 808 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 NLRP6P59044 892 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PLCB4Q15147 1175 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 KCTD16Q68DU8 428 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ABTB1Q969K4 478 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 MKL1Q969V6 931 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 RMDN2Q96LZ7 410 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 HINFPQ9BQA5 517 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 TCHPQ9BT92 498 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ITM2BQ9Y287 266 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 VWA3AA6NCI4 1184 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 GUCY1B3Q02153 619 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 TAF11Q15544 211 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 IMMTQ16891 758 aaKnown RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 FKBP15Q5T1M5 1219 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC70Q6NSX1 233 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 SYNE3Q6ZMZ3 975 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ARHGEF25Q86VW2 580 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 LMNTD2Q8IXW0 634 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 GALNT15Q8N3T1 639 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 CAGE1Q8TC20 777 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 MAIP1Q8WWC4 291 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 IP6K1Q92551 441 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PPP1R12CQ9BZL4 782 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 C19orf44Q9H6X5 657 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PPANQ9NQ55 473 aaKnown RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 UTP6Q9NYH9 597 aaKnown RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 HPCAL4Q9UM19 191 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 CTAGE9A4FU28 777 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ELL2O00472 640 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 KRT38O76015 456 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 HNRNPCP07910 306 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PDHA1P08559 390 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 UBASH3AP57075 661 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ADCY1Q08828 1119 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 SF3A3Q12874 501 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ESCO1Q5FWF5 840 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 ATP11CQ8NB49 1132 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms