RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 KRT23Q9C075 422 aa16.5■□□□□ 0.23
CCM2-217ENST00000492883 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
CCM2-217ENST00000492883 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
CCM2-217ENST00000492883 IL17RBQ9NRM6 502 aa16.5■□□□□ 0.23
CCM2-217ENST00000492883 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
CCM2-217ENST00000492883 NEDD4P46934 1319 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 B4E1Z4 1266 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 F5H6K3 240 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 NMT2O60551 498 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 KDM4AO75164 1064 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 CYP21A2P08686 494 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 NT5C2P49902 561 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 KLRC3Q07444 240 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 MKL1Q969V6 931 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
CCM2-217ENST00000492883 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
CCM2-217ENST00000492883 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
CCM2-217ENST00000492883 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
CCM2-217ENST00000492883 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
CCM2-217ENST00000492883 ERO1AQ96HE7 468 aa16.48■□□□□ 0.23
CCM2-217ENST00000492883 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
CCM2-217ENST00000492883 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
CCM2-217ENST00000492883 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
CCM2-217ENST00000492883 KIF22Q14807 665 aa16.47■□□□□ 0.23
CCM2-217ENST00000492883 COL13A1Q5TAT6 717 aaPredicted RBP16.47■□□□□ 0.23
CCM2-217ENST00000492883 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
CCM2-217ENST00000492883 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
CCM2-217ENST00000492883 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
CCM2-217ENST00000492883 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
CCM2-217ENST00000492883 ADGRA2Q96PE1 1338 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 E7EWF7 191 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 SLC27A2O14975 620 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
CCM2-217ENST00000492883 REC8O95072 547 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 NDUFB10O96000 172 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 BCRP11274 1271 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 HERVK_113P62684 666 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 COG2Q14746 738 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
CCM2-217ENST00000492883 NCOA7Q8NI08 942 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 TTC14Q96N46 770 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 HOXC10Q9NYD6 342 aa16.46■□□□□ 0.23
CCM2-217ENST00000492883 FLOT1O75955 427 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 GTF3C2Q8WUA4 911 aaPredicted RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
CCM2-217ENST00000492883 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
CCM2-217ENST00000492883 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CCM2-217ENST00000492883 NOVP48745 357 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 CTU1Q7Z7A3 348 aaKnown RBP16.44■□□□□ 0.22
CCM2-217ENST00000492883 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 GPRC5AQ8NFJ5 357 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 TMEM47Q9BQJ4 181 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 TRIM17Q9Y577 477 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 TAF6LQ9Y6J9 622 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 PHIPQ8WWQ0 1821 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 ATAD5Q96QE3 1844 aa16.44■□□□□ 0.22
CCM2-217ENST00000492883 MCCP23508 829 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 SLC1A4P43007 532 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 PSMC4P43686 418 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 FAM110CQ1W6H9 321 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 STOX1Q6ZVD7 989 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
CCM2-217ENST00000492883 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 RBPJLQ9UBG7 517 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 LAMB1P07942 1786 aa16.43■□□□□ 0.22
CCM2-217ENST00000492883 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
CCM2-217ENST00000492883 PEX10O60683 326 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 BMP3P12645 472 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
CCM2-217ENST00000492883 DSG3P32926 999 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 FCGRTP55899 365 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 KAT14Q9H8E8 782 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 TXNRD2Q9NNW7 524 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 FBXO28Q9NVF7 368 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
CCM2-217ENST00000492883 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms