RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SERPINB13Q9UIV8 391 aa15.98■□□□□ 0.15
HDAC3-213ENST00000492506 ATP11BQ9Y2G3 1177 aa15.98■□□□□ 0.15
HDAC3-213ENST00000492506 TRIM27P14373 513 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 CYP7A1P22680 504 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 RAB3GAP1Q15042 981 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 OLFML2BQ68BL8 750 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 RPAP3Q9H6T3 665 aaPredicted RBP15.97■□□□□ 0.15
HDAC3-213ENST00000492506 PRKAG2Q9UGJ0 569 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 IVNS1ABPQ9Y6Y0 642 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 MYH8P13535 1937 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
HDAC3-213ENST00000492506 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.15
HDAC3-213ENST00000492506 SHMT1P34896 483 aa15.96■□□□□ 0.15
HDAC3-213ENST00000492506 ABCB5Q2M3G0 1257 aa15.96■□□□□ 0.15
HDAC3-213ENST00000492506 CERKLQ49MI3 558 aaPredicted RBP15.96■□□□□ 0.15
HDAC3-213ENST00000492506 MIGA1Q8NAN2 632 aa15.96■□□□□ 0.15
HDAC3-213ENST00000492506 ARRDC4Q8NCT1 418 aa15.96■□□□□ 0.15
HDAC3-213ENST00000492506 MAFAQ8NHW3 353 aaPredicted RBP15.96■□□□□ 0.15
HDAC3-213ENST00000492506 BADQ92934 168 aa15.96■□□□□ 0.15
HDAC3-213ENST00000492506 MOV10L1Q9BXT6 1211 aaKnown RBP15.96■□□□□ 0.15
HDAC3-213ENST00000492506 DBNLQ9UJU6 430 aaKnown RBP15.96■□□□□ 0.15
HDAC3-213ENST00000492506 ADORA2AP29274 412 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 PLCD1P51178 756 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 SMAD3P84022 425 aaKnown RBP15.95■□□□□ 0.14
HDAC3-213ENST00000492506 TRIM60Q495X7 471 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 SSH3Q8TE77 659 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 MYLIPQ8WY64 445 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 PDLIM7Q9NR12 457 aa15.95■□□□□ 0.14
HDAC3-213ENST00000492506 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
HDAC3-213ENST00000492506 A0A1W2PRG0 241 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 SEPT4O43236 478 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 STRNO43815 780 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 COBLO75128 1261 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 USP5P45974 858 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 C1orf53Q5VUE5 145 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 DPP9Q86TI2 863 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 TTC6Q86TZ1 520 aa15.94■□□□□ 0.14
HDAC3-213ENST00000492506 TRIM43Q96BQ3 446 aaPredicted RBP15.94■□□□□ 0.14
HDAC3-213ENST00000492506 PRDM5Q9NQX1 630 aaPredicted RBP15.94■□□□□ 0.14
HDAC3-213ENST00000492506 KBTBD13C9JR72 458 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 IDH1O75874 414 aaKnown RBP15.93■□□□□ 0.14
HDAC3-213ENST00000492506 ITGB8P26012 769 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 ADCYAP1R1P41586 468 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 EVX2Q03828 476 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 GABPAQ06546 454 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 COG2Q14746 738 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 SEPT2Q15019 361 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 CERS3Q8IU89 383 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 MAGEB6Q8N7X4 407 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 SHCBP1Q8NEM2 672 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 SPATC1LQ9H0A9 340 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 ANTXR1Q9H6X2 564 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 PRDM6Q9NQX0 595 aa15.93■□□□□ 0.14
HDAC3-213ENST00000492506 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
HDAC3-213ENST00000492506 ERCC3P19447 782 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 ATP8B2P98198 1209 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 LRRC41Q15345 812 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 KIAA1755Q5JYT7 1200 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 EAF2Q96CJ1 260 aaPredicted RBP15.92■□□□□ 0.14
HDAC3-213ENST00000492506 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
HDAC3-213ENST00000492506 CABP5Q9NP86 173 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 CHD9Q3L8U1 2897 aa15.92■□□□□ 0.14
HDAC3-213ENST00000492506 SURF6O75683 361 aaKnown RBP15.91■□□□□ 0.14
HDAC3-213ENST00000492506 BCAR3O75815 825 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 EPHB4P54760 987 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 TLE2Q04725 743 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
HDAC3-213ENST00000492506 FAM47AQ5JRC9 791 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 FERMT2Q96AC1 680 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
HDAC3-213ENST00000492506 CCDC8Q9H0W5 538 aaPredicted RBP15.91■□□□□ 0.14
HDAC3-213ENST00000492506 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
HDAC3-213ENST00000492506 ABRAQ8N0Z2 381 aa15.9■□□□□ 0.14
HDAC3-213ENST00000492506 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
HDAC3-213ENST00000492506 MAML3Q96JK9 1138 aa15.9■□□□□ 0.14
HDAC3-213ENST00000492506 PHF24Q9UPV7 400 aa15.9■□□□□ 0.14
HDAC3-213ENST00000492506 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
HDAC3-213ENST00000492506 MS4A1P11836 297 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 FOSL2P15408 326 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 DSG3P32926 999 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 TMED8Q6PL24 325 aaPredicted RBP15.89■□□□□ 0.13
HDAC3-213ENST00000492506 SIAH1Q8IUQ4 282 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
HDAC3-213ENST00000492506 TANGO6Q9C0B7 1094 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 MROH8Q9H579 483 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 MYO9BQ13459 2157 aa15.89■□□□□ 0.13
HDAC3-213ENST00000492506 TMEM265A0A087WTH1 108 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 MAP3K12Q12852 859 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 GSE1Q14687 1217 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 MB21D1Q8N884 522 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 C1orf115Q9H7X2 142 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 TACC3Q9Y6A5 838 aa15.88■□□□□ 0.13
HDAC3-213ENST00000492506 REV3LO60673 3130 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms