RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 PAGR1Q9BTK6 254 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 RABGAP1Q9Y3P9 1069 aa17.6■□□□□ 0.41
SS18L1-205ENST00000492466 A0A1W2PRG0 241 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 EVI5O60447 810 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
SS18L1-205ENST00000492466 USP14P54578 494 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 CACNB2Q08289 660 aaPredicted RBP17.59■□□□□ 0.41
SS18L1-205ENST00000492466 SEPT2Q15019 361 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 CCL14Q16627 93 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 LBX2Q6XYB7 198 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 SDR42E1Q8WUS8 393 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 DCP1AQ9NPI6 582 aaPredicted RBP17.59■□□□□ 0.41
SS18L1-205ENST00000492466 A0A0C4DFX4 3053 aa17.59■□□□□ 0.41
SS18L1-205ENST00000492466 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 RNF113AO15541 343 aaKnown RBP17.58■□□□□ 0.4
SS18L1-205ENST00000492466 CHGBP05060 677 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 APPBP2Q92624 585 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 FEZ1Q99689 392 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 MCM9Q9NXL9 1143 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
SS18L1-205ENST00000492466 SMIM22K7EJ46 135 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 CYP2D6P10635 497 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 LHX8Q68G74 356 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 SIAH1Q8IUQ4 282 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 CABP5Q9NP86 173 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 SLC4A4Q9Y6R1 1079 aa17.57■□□□□ 0.4
SS18L1-205ENST00000492466 SPDYE16A6NNV3 312 aaPredicted RBP17.56■□□□□ 0.4
SS18L1-205ENST00000492466 PRKAB2O43741 272 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 IGHA2P01877 340 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 CCND3P30281 292 aaPredicted RBP17.56■□□□□ 0.4
SS18L1-205ENST00000492466 RGS2P41220 211 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 MAP2K5Q13163 448 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
SS18L1-205ENST00000492466 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 EVI5LQ96CN4 794 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 FLRT1Q9NZU1 646 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 RLFQ13129 1914 aa17.56■□□□□ 0.4
SS18L1-205ENST00000492466 PFASO15067 1338 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 COL6A1P12109 1028 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
SS18L1-205ENST00000492466 PTPREP23469 700 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 APBA2Q99767 749 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 PUS7LQ9H0K6 701 aaKnown RBP17.55■□□□□ 0.4
SS18L1-205ENST00000492466 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
SS18L1-205ENST00000492466 ATP8A2Q9NTI2 1148 aa17.55■□□□□ 0.4
SS18L1-205ENST00000492466 GPAA1O43292 621 aa17.54■□□□□ 0.4
SS18L1-205ENST00000492466 APPP05067 770 aa17.54■□□□□ 0.4
SS18L1-205ENST00000492466 GDF15Q99988 308 aa17.54■□□□□ 0.4
SS18L1-205ENST00000492466 A0A1W2PPC1 479 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 SLC15A5A6NIM6 579 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 HOXC6P09630 235 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 TDO2P48775 406 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 CCNA1P78396 465 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 GRB14Q14449 540 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SS18L1-205ENST00000492466 C11orf49Q9H6J7 331 aa17.53■□□□□ 0.4
SS18L1-205ENST00000492466 M0R2C6 588 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 SOX1O00570 391 aaPredicted RBP17.52■□□□□ 0.4
SS18L1-205ENST00000492466 GNAT2P19087 354 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 COG2Q14746 738 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 C12orf60Q5U649 245 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 TMEM179Q6ZVK1 233 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 C7orf61Q8IZ16 206 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 NPLOC4Q8TAT6 608 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 SWAP70Q9UH65 585 aa17.52■□□□□ 0.4
SS18L1-205ENST00000492466 CYP2D7A0A087X1C5 515 aa17.51■□□□□ 0.39
SS18L1-205ENST00000492466 A0A0G2JMZ2 1700 aa17.51■□□□□ 0.39
SS18L1-205ENST00000492466 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
SS18L1-205ENST00000492466 AKR1B1P15121 316 aa17.51■□□□□ 0.39
SS18L1-205ENST00000492466 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
SS18L1-205ENST00000492466 NACAP1Q9BZK3 213 aa17.51■□□□□ 0.39
SS18L1-205ENST00000492466 HOXC10Q9NYD6 342 aa17.51■□□□□ 0.39
SS18L1-205ENST00000492466 ARPP21Q9UBL0 812 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-205ENST00000492466 ZMYND8Q9ULU4 1186 aaPredicted RBP17.51■□□□□ 0.39
SS18L1-205ENST00000492466 USP17L12C9JPN9 530 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 USP17L21D6R901 530 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 BMP8BP34820 402 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 ZMYM1Q5SVZ6 1142 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 STRBPQ96SI9 672 aaKnown RBP17.5■□□□□ 0.39
SS18L1-205ENST00000492466 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
SS18L1-205ENST00000492466 DSG3P32926 999 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 CDK8P49336 464 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 WDR78Q5VTH9 848 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
SS18L1-205ENST00000492466 TRPV1Q8NER1 839 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
SS18L1-205ENST00000492466 OSBPL3Q9H4L5 887 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
SS18L1-205ENST00000492466 MINDY4BA8MYZ0 360 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms