RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 IGHDP01880 384 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 INHAP05111 366 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 GJB1P08034 283 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 COG2Q14746 738 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 CLEC10AQ8IUN9 316 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 SOCS4Q8WXH5 440 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 VCPKMTQ9H867 229 aa32.39■■■□□ 2.78
SH3GL3-204ENST00000492099 BRCA2P51587 3418 aa32.38■■■□□ 2.77
SH3GL3-204ENST00000492099 B4GALNT3Q6L9W6 998 aa32.38■■■□□ 2.77
SH3GL3-204ENST00000492099 TICAM2Q86XR7 235 aa32.38■■■□□ 2.77
SH3GL3-204ENST00000492099 NUDT12Q9BQG2 462 aa32.38■■■□□ 2.77
SH3GL3-204ENST00000492099 TANGO6Q9C0B7 1094 aa32.38■■■□□ 2.77
SH3GL3-204ENST00000492099 SPDYE16A6NNV3 312 aaPredicted RBP32.37■■■□□ 2.77
SH3GL3-204ENST00000492099 CNMDO75829 334 aa32.37■■■□□ 2.77
SH3GL3-204ENST00000492099 EEF2P13639 858 aaKnown RBP32.37■■■□□ 2.77
SH3GL3-204ENST00000492099 PORCNQ9H237 461 aa32.37■■■□□ 2.77
SH3GL3-204ENST00000492099 RASA1P20936 1047 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 GJA8P48165 433 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 PLEKHH3Q7Z736 793 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 CHD1LQ86WJ1 897 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 STK11IPQ8N1F8 1099 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 UNC93B1Q9H1C4 597 aa32.36■■■□□ 2.77
SH3GL3-204ENST00000492099 ATP2B2Q01814 1243 aa32.35■■■□□ 2.77
SH3GL3-204ENST00000492099 KIAA1755Q5JYT7 1200 aa32.35■■■□□ 2.77
SH3GL3-204ENST00000492099 GPR142Q7Z601 462 aa32.35■■■□□ 2.77
SH3GL3-204ENST00000492099 NAPBQ9H115 298 aa32.35■■■□□ 2.77
SH3GL3-204ENST00000492099 CWC22Q9HCG8 908 aaKnown RBP32.35■■■□□ 2.77
SH3GL3-204ENST00000492099 WDR46O15213 610 aaKnown RBP32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 HMGCRP04035 888 aa32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 XRCC5P13010 732 aaKnown RBP32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 NUCB1Q02818 461 aa32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 ZNF444Q8N0Y2 327 aaPredicted RBP32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 SPICE1Q8N0Z3 855 aa32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 BTBD7Q9P203 1132 aa32.34■■■□□ 2.77
SH3GL3-204ENST00000492099 SLC3A2P08195 630 aaKnown RBP32.33■■■□□ 2.77
SH3GL3-204ENST00000492099 CYP2B6P20813 491 aa32.33■■■□□ 2.77
SH3GL3-204ENST00000492099 PRPF38BQ5VTL8 546 aaKnown RBP32.33■■■□□ 2.77
SH3GL3-204ENST00000492099 GOPCQ9HD26 462 aa32.33■■■□□ 2.77
SH3GL3-204ENST00000492099 HELLSQ9NRZ9 838 aa32.33■■■□□ 2.77
SH3GL3-204ENST00000492099 CAPN2P17655 700 aa32.32■■■□□ 2.76
SH3GL3-204ENST00000492099 TRMT44Q8IYL2 757 aaKnown RBP32.32■■■□□ 2.76
SH3GL3-204ENST00000492099 MB21D1Q8N884 522 aa32.32■■■□□ 2.76
SH3GL3-204ENST00000492099 FLOT1O75955 427 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 PDE4BQ07343 736 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 MORN1Q5T089 497 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 U2AF1L4Q8WU68 220 aaKnown RBP32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 USP6NLQ92738 828 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 SHISA4Q96DD7 197 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 NYAP2Q9P242 653 aa32.31■■■□□ 2.76
SH3GL3-204ENST00000492099 DSG3P32926 999 aa32.3■■■□□ 2.76
SH3GL3-204ENST00000492099 RGS2P41220 211 aa32.3■■■□□ 2.76
SH3GL3-204ENST00000492099 CCDC129Q6ZRS4 1044 aa32.3■■■□□ 2.76
SH3GL3-204ENST00000492099 OSBPL3Q9H4L5 887 aa32.3■■■□□ 2.76
SH3GL3-204ENST00000492099 TRIM6-TRIM34B2RNG4 842 aa32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 SGPL1O95470 568 aa32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 PPARAQ07869 468 aa32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 WDR78Q5VTH9 848 aa32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 PLEKHM2Q8IWE5 1019 aa32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 PAK6Q9NQU5 681 aaPredicted RBP32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 MKI67P46013 3256 aaKnown RBP32.29■■■□□ 2.76
SH3GL3-204ENST00000492099 PLXNB2O15031 1838 aa32.28■■■□□ 2.76
SH3GL3-204ENST00000492099 PRDM1O75626 825 aa32.28■■■□□ 2.76
SH3GL3-204ENST00000492099 TRIB2Q92519 343 aa32.28■■■□□ 2.76
SH3GL3-204ENST00000492099 IVNS1ABPQ9Y6Y0 642 aa32.28■■■□□ 2.76
SH3GL3-204ENST00000492099 SLC15A5A6NIM6 579 aa32.27■■■□□ 2.76
SH3GL3-204ENST00000492099 MCMDC2Q4G0Z9 681 aa32.27■■■□□ 2.76
SH3GL3-204ENST00000492099 RILPL2Q969X0 211 aa32.27■■■□□ 2.76
SH3GL3-204ENST00000492099 RPTORQ8N122 1335 aa32.26■■■□□ 2.76
SH3GL3-204ENST00000492099 IGKV6D-41A0A0C4DH26 115 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 RAD21O60216 631 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 PTPREP23469 700 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 MAP2K5Q13163 448 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 DEFB118Q96PH6 123 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 APBA2Q99767 749 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 SPATC1LQ9H0A9 340 aa32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 HMX1Q9NP08 348 aaPredicted RBP32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 GREB1LQ9C091 1923 aaPredicted RBP32.26■■■□□ 2.75
SH3GL3-204ENST00000492099 FOXP2O15409 715 aa32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 ZKSCAN1P17029 563 aaPredicted RBP32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 SHCBP1Q8NEM2 672 aa32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 ATG4CQ96DT6 458 aa32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 FAM227BQ96M60 508 aa32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 MOV10L1Q9BXT6 1211 aaKnown RBP32.25■■■□□ 2.75
SH3GL3-204ENST00000492099 TFRCP02786 760 aaKnown RBP32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 TSPY3P0CV98 308 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 TSPY8P0CW00 308 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 ALX1Q15699 326 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 MTMR4Q9NYA4 1195 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 CLIP2Q9UDT6 1046 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 SYNPO2Q9UMS6 1093 aa32.24■■■□□ 2.75
SH3GL3-204ENST00000492099 A0A0D9SFI3 127 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 TRIM32Q13049 653 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 GRB14Q14449 540 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 VPS53Q5VIR6 699 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 NEDD1Q8NHV4 660 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 MKL1Q969V6 931 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 CEP95Q96GE4 821 aa32.23■■■□□ 2.75
SH3GL3-204ENST00000492099 ADAMTS5Q9UNA0 930 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms