RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 LBX2Q6XYB7 198 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 GPR142Q7Z601 462 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 SPICE1Q8N0Z3 855 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 U2AF1L4Q8WU68 220 aaKnown RBP17.94■□□□□ 0.46
TOM1-215ENST00000491987 NUDT12Q9BQG2 462 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 LNPKQ9C0E8 428 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 MKNK2Q9HBH9 465 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 BTBD7Q9P203 1132 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 DOCK3Q8IZD9 2030 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 HMGCRP04035 888 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
TOM1-215ENST00000491987 RASA1P20936 1047 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 PLEKHH3Q7Z736 793 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 IFNL3Q8IZI9 196 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 SOCS4Q8WXH5 440 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
TOM1-215ENST00000491987 VCPKMTQ9H867 229 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
TOM1-215ENST00000491987 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
TOM1-215ENST00000491987 CCNA1P78396 465 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 TRIM32Q13049 653 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 COG2Q14746 738 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 WDR78Q5VTH9 848 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 TRIB2Q92519 343 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 LPAR1Q92633 364 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.92■□□□□ 0.46
TOM1-215ENST00000491987 NACAP1Q9BZK3 213 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 KANSL2Q9H9L4 492 aa17.92■□□□□ 0.46
TOM1-215ENST00000491987 SGPL1O95470 568 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 IGHDP01880 384 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 MORN1Q5T089 497 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 CCDC129Q6ZRS4 1044 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.91■□□□□ 0.467e-6■□□□□ 9.4
TOM1-215ENST00000491987 HOXC10Q9NYD6 342 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
TOM1-215ENST00000491987 A0A0G2JMZ2 1700 aa17.91■□□□□ 0.46
TOM1-215ENST00000491987 GREB1LQ9C091 1923 aaPredicted RBP17.9■□□□□ 0.46
TOM1-215ENST00000491987 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
TOM1-215ENST00000491987 RAD21O60216 631 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 PRDM1O75626 825 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 FLOT1O75955 427 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 RGS2P41220 211 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
TOM1-215ENST00000491987 USP6NLQ92738 828 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 NAPBQ9H115 298 aa17.9■□□□□ 0.46
TOM1-215ENST00000491987 PAK6Q9NQU5 681 aaPredicted RBP17.9■□□□□ 0.46
TOM1-215ENST00000491987 MKI67P46013 3256 aaKnown RBP17.9■□□□□ 0.46
TOM1-215ENST00000491987 XRCC5P13010 732 aaKnown RBP17.89■□□□□ 0.45
TOM1-215ENST00000491987 ZKSCAN1P17029 563 aaPredicted RBP17.89■□□□□ 0.45
TOM1-215ENST00000491987 DSG3P32926 999 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 CCL14Q16627 93 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 ATG4CQ96DT6 458 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 APBA2Q99767 749 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 GOPCQ9HD26 462 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 RLFQ13129 1914 aa17.89■□□□□ 0.45
TOM1-215ENST00000491987 TFRCP02786 760 aaKnown RBP17.88■□□□□ 0.45
TOM1-215ENST00000491987 PTPREP23469 700 aa17.88■□□□□ 0.45
TOM1-215ENST00000491987 MAP2K5Q13163 448 aa17.88■□□□□ 0.45
TOM1-215ENST00000491987 CHD1LQ86WJ1 897 aa17.88■□□□□ 0.45
TOM1-215ENST00000491987 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
TOM1-215ENST00000491987 MOV10L1Q9BXT6 1211 aaKnown RBP17.88■□□□□ 0.45
TOM1-215ENST00000491987 HMX1Q9NP08 348 aaPredicted RBP17.88■□□□□ 0.45
TOM1-215ENST00000491987 SLC15A5A6NIM6 579 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 FOXP2O15409 715 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
TOM1-215ENST00000491987 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
TOM1-215ENST00000491987 PPARAQ07869 468 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 PLS1Q14651 629 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 VPS53Q5VIR6 699 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 UBE2Q1Q7Z7E8 422 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 TRMT44Q8IYL2 757 aaKnown RBP17.87■□□□□ 0.45
TOM1-215ENST00000491987 MB21D1Q8N884 522 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 SPATC1LQ9H0A9 340 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 IVNS1ABPQ9Y6Y0 642 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 RPTORQ8N122 1335 aa17.87■□□□□ 0.45
TOM1-215ENST00000491987 IGKV6D-41A0A0C4DH26 115 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
TOM1-215ENST00000491987 NUCB1Q02818 461 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 PDE4BQ07343 736 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 FAM227BQ96M60 508 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 CRISPLD2Q9H0B8 497 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 HELLSQ9NRZ9 838 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 NYAP2Q9P242 653 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 PARP14Q460N5 1801 aa17.86■□□□□ 0.45
TOM1-215ENST00000491987 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
TOM1-215ENST00000491987 ERCC3P19447 782 aa17.85■□□□□ 0.45
TOM1-215ENST00000491987 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
TOM1-215ENST00000491987 GRB14Q14449 540 aa17.85■□□□□ 0.45
TOM1-215ENST00000491987 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
TOM1-215ENST00000491987 MAP3K21Q5TCX8 1036 aa17.85■□□□□ 0.45
TOM1-215ENST00000491987 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms