RNA–Protein interactions for RNA: ENST00000491907.5

CCNB3-207, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 310 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-207ENST00000491907 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNB3-207ENST00000491907 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CCNB3-207ENST00000491907 ZFPM1Q8IX07 1006 aa12.63□□□□□ -0.39
CCNB3-207ENST00000491907 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
CCNB3-207ENST00000491907 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
CCNB3-207ENST00000491907 LCHNA4D1U4 455 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 IGHA2P01877 340 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
CCNB3-207ENST00000491907 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
CCNB3-207ENST00000491907 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 N4BP2L1Q5TBK1 243 aaPredicted RBP12.62□□□□□ -0.39
CCNB3-207ENST00000491907 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 SERPINA10Q9UK55 444 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 MYO7AQ13402 2215 aa12.62□□□□□ -0.39
CCNB3-207ENST00000491907 FKBP1AP62942 108 aaKnown RBP12.61□□□□□ -0.39
CCNB3-207ENST00000491907 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
CCNB3-207ENST00000491907 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 Q3C1V9 767 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 TCEAL5Q5H9L2 206 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 NPLOC4Q8TAT6 608 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 KCNK4Q9NYG8 393 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
CCNB3-207ENST00000491907 KIF28PB7ZC32 967 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 CCL23P55773 120 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 PDZD3Q86UT5 571 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 HERC6Q8IVU3 1022 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
CCNB3-207ENST00000491907 SUMF1Q8NBK3 374 aa12.6□□□□□ -0.39
CCNB3-207ENST00000491907 IRS4O14654 1257 aaPredicted RBP12.59□□□□□ -0.39
CCNB3-207ENST00000491907 PGK1P00558 417 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 PLA2G2AP14555 144 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 ICAM3P32942 547 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 CDK7P50613 346 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 COPS6Q7L5N1 327 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 ANKRD18AQ8IVF6 992 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 SLC9A7Q96T83 725 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 SIP14410 1827 aa12.59□□□□□ -0.39
CCNB3-207ENST00000491907 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
CCNB3-207ENST00000491907 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 RNF180Q86T96 592 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
CCNB3-207ENST00000491907 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
CCNB3-207ENST00000491907 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 MRPL38Q96DV4 380 aaKnown RBP12.58□□□□□ -0.4
CCNB3-207ENST00000491907 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
CCNB3-207ENST00000491907 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 TTF2Q9UNY4 1162 aaKnown RBP12.58□□□□□ -0.4
CCNB3-207ENST00000491907 MROH7Q68CQ1 1323 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
CCNB3-207ENST00000491907 CRKP46108 304 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 CLCN5P51795 746 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 ERVK-21P61565 698 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 C19orf57Q0VDD7 668 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
CCNB3-207ENST00000491907 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
CCNB3-207ENST00000491907 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 PHOSPHO2Q8TCD6 241 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CCNB3-207ENST00000491907 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.57□□□□□ -0.4
CCNB3-207ENST00000491907 LAMA5O15230 3695 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 FBN3Q75N90 2809 aa12.57□□□□□ -0.4
CCNB3-207ENST00000491907 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
CCNB3-207ENST00000491907 SLC30A4O14863 429 aa12.56□□□□□ -0.4
CCNB3-207ENST00000491907 FAM117BQ6P1L5 589 aa12.56□□□□□ -0.4
CCNB3-207ENST00000491907 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
CCNB3-207ENST00000491907 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
CCNB3-207ENST00000491907 TMEM8BA6NDV4 472 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 PI15O43692 258 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 HOXC6P09630 235 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 ACLYP53396 1101 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 CTC1Q2NKJ3 1217 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 TIGD5Q53EQ6 642 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
CCNB3-207ENST00000491907 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 DTWD2Q8NBA8 298 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 TGS1Q96RS0 853 aaKnown RBP12.55□□□□□ -0.4
CCNB3-207ENST00000491907 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 LEMD3Q9Y2U8 911 aa12.55□□□□□ -0.4
CCNB3-207ENST00000491907 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 ERVK-9P63128 1117 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 ERVK-24P63145 666 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 EVX2Q03828 476 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCNB3-207ENST00000491907 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
CCNB3-207ENST00000491907 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
CCNB3-207ENST00000491907 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
CCNB3-207ENST00000491907 NTRK1P04629 796 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms