RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SOX1O00570 391 aaPredicted RBP13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 ATP5JP18859 108 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 MAPK4P31152 587 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L24Q0WX57 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 SOCS4Q8WXH5 440 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 HAUS7Q99871 368 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 RPAP3Q9H6T3 665 aaPredicted RBP13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 AKR1B1P15121 316 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 CACNB2Q08289 660 aaPredicted RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 CENPQQ7L2Z9 268 aaPredicted RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 CHD1LQ86WJ1 897 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 ZNFX1Q9P2E3 1918 aaKnown RBP13.25□□□□□ -0.29
TMEM39A-211ENST00000491685 PFASO15067 1338 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 RGS2P41220 211 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 USP14P54578 494 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 NUCB1Q02818 461 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 SIAH1Q8IUQ4 282 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 APBA2Q99767 749 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 OGDHLQ9ULD0 1010 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
TMEM39A-211ENST00000491685 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 EVI5O60447 810 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 PUS7LQ9H0K6 701 aaKnown RBP13.23□□□□□ -0.29
TMEM39A-211ENST00000491685 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 PTPREP23469 700 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 C12orf60Q5U649 245 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 LHX8Q68G74 356 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 TMEM179Q6ZVK1 233 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 LNPKQ9C0E8 428 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
TMEM39A-211ENST00000491685 LTBP2Q14767 1821 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L12C9JPN9 530 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L21D6R901 530 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 CDK8P49336 464 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 GRB14Q14449 540 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 UBE3CQ15386 1083 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 ZMYND8Q9ULU4 1186 aaPredicted RBP13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
TMEM39A-211ENST00000491685 SLC15A5A6NIM6 579 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 COL6A1P12109 1028 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 SYN1P17600 705 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 MX1P20591 662 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 BMP8BP34820 402 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 CCNA1P78396 465 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 ICA1Q05084 483 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
TMEM39A-211ENST00000491685 IGHA2P01877 340 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 CYP2C19P33261 490 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 GDF15Q99988 308 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 STXBP5LQ9Y2K9 1186 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
TMEM39A-211ENST00000491685 HOXC6P09630 235 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 ERCC3P19447 782 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 ADORA2AP29274 412 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 DSG3P32926 999 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 PDE1AP54750 535 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 COG2Q14746 738 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms