RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
APP-216ENST00000491395 SPICE1Q8N0Z3 855 aa9.97□□□□□ -0.81
APP-216ENST00000491395 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
APP-216ENST00000491395 APBA2Q99767 749 aa9.97□□□□□ -0.81
APP-216ENST00000491395 MOV10L1Q9BXT6 1211 aaKnown RBP9.97□□□□□ -0.81
APP-216ENST00000491395 TANGO6Q9C0B7 1094 aa9.97□□□□□ -0.81
APP-216ENST00000491395 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
APP-216ENST00000491395 HOXC10Q9NYD6 342 aa9.97□□□□□ -0.81
APP-216ENST00000491395 FLRT1Q9NZU1 646 aa9.97□□□□□ -0.81
APP-216ENST00000491395 OGDHLQ9ULD0 1010 aa9.97□□□□□ -0.81
APP-216ENST00000491395 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
APP-216ENST00000491395 ATAD5Q96QE3 1844 aa9.97□□□□□ -0.81
APP-216ENST00000491395 MGAMO43451 1857 aa9.97□□□□□ -0.81
APP-216ENST00000491395 FOCADQ5VW36 1801 aa9.96□□□□□ -0.81
APP-216ENST00000491395 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.81
APP-216ENST00000491395 EEF2P13639 858 aaKnown RBP9.96□□□□□ -0.82
APP-216ENST00000491395 DSG3P32926 999 aa9.96□□□□□ -0.82
APP-216ENST00000491395 ATP2B2Q01814 1243 aa9.96□□□□□ -0.82
APP-216ENST00000491395 ICA1Q05084 483 aa9.96□□□□□ -0.82
APP-216ENST00000491395 MFSD14CQ5VZR4 134 aa9.96□□□□□ -0.82
APP-216ENST00000491395 LHX8Q68G74 356 aa9.96□□□□□ -0.82
APP-216ENST00000491395 C16orf86Q6ZW13 317 aa9.96□□□□□ -0.82
APP-216ENST00000491395 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
APP-216ENST00000491395 C7orf61Q8IZ16 206 aa9.96□□□□□ -0.82
APP-216ENST00000491395 KBTBD3Q8NAB2 608 aa9.96□□□□□ -0.82
APP-216ENST00000491395 OSBP2Q969R2 916 aa9.96□□□□□ -0.82
APP-216ENST00000491395 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
APP-216ENST00000491395 CCDC17Q96LX7 622 aa9.96□□□□□ -0.82
APP-216ENST00000491395 PRO3102Q9H379 93 aa9.96□□□□□ -0.82
APP-216ENST00000491395 C11orf49Q9H6J7 331 aa9.96□□□□□ -0.82
APP-216ENST00000491395 VCPKMTQ9H867 229 aa9.96□□□□□ -0.82
APP-216ENST00000491395 ARHGEF10LQ9HCE6 1279 aa9.96□□□□□ -0.82
APP-216ENST00000491395 STAP2Q9UGK3 403 aa9.96□□□□□ -0.82
APP-216ENST00000491395 TMX2Q9Y320 296 aa9.96□□□□□ -0.82
APP-216ENST00000491395 GSG1L2A8MUP6 293 aa9.95□□□□□ -0.82
APP-216ENST00000491395 RNF113AO15541 343 aaKnown RBP9.95□□□□□ -0.82
APP-216ENST00000491395 FLOT1O75955 427 aa9.95□□□□□ -0.82
APP-216ENST00000491395 HOXC6P09630 235 aa9.95□□□□□ -0.82
APP-216ENST00000491395 ERCC3P19447 782 aa9.95□□□□□ -0.82
APP-216ENST00000491395 CYP2C19P33261 490 aa9.95□□□□□ -0.82
APP-216ENST00000491395 GRB14Q14449 540 aa9.95□□□□□ -0.82
APP-216ENST00000491395 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
APP-216ENST00000491395 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
APP-216ENST00000491395 NPLOC4Q8TAT6 608 aa9.95□□□□□ -0.82
APP-216ENST00000491395 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
APP-216ENST00000491395 LPAR1Q92633 364 aa9.95□□□□□ -0.82
APP-216ENST00000491395 ATG4CQ96DT6 458 aa9.95□□□□□ -0.82
APP-216ENST00000491395 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
APP-216ENST00000491395 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
APP-216ENST00000491395 SPATC1LQ9H0A9 340 aa9.95□□□□□ -0.82
APP-216ENST00000491395 KANSL2Q9H9L4 492 aa9.95□□□□□ -0.82
APP-216ENST00000491395 ZMYND8Q9ULU4 1186 aaPredicted RBP9.95□□□□□ -0.82
APP-216ENST00000491395 IVNS1ABPQ9Y6Y0 642 aa9.95□□□□□ -0.82
APP-216ENST00000491395 MYH1P12882 1939 aa9.95□□□□□ -0.82
APP-216ENST00000491395 PFASO15067 1338 aa9.94□□□□□ -0.82
APP-216ENST00000491395 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
APP-216ENST00000491395 ADORA2AP29274 412 aa9.94□□□□□ -0.82
APP-216ENST00000491395 PLS1Q14651 629 aa9.94□□□□□ -0.82
APP-216ENST00000491395 DPP9Q86TI2 863 aa9.94□□□□□ -0.82
APP-216ENST00000491395 TRPV1Q8NER1 839 aa9.94□□□□□ -0.82
APP-216ENST00000491395 APPBP2Q92624 585 aa9.94□□□□□ -0.82
APP-216ENST00000491395 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
APP-216ENST00000491395 FBXO28Q9NVF7 368 aa9.94□□□□□ -0.82
APP-216ENST00000491395 M0R2C6 588 aa9.93□□□□□ -0.82
APP-216ENST00000491395 WDR46O15213 610 aaKnown RBP9.93□□□□□ -0.82
APP-216ENST00000491395 GPAA1O43292 621 aa9.93□□□□□ -0.82
APP-216ENST00000491395 RAD21O60216 631 aa9.93□□□□□ -0.82
APP-216ENST00000491395 COBLO75128 1261 aa9.93□□□□□ -0.82
APP-216ENST00000491395 IGHA2P01877 340 aa9.93□□□□□ -0.82
APP-216ENST00000491395 COL6A1P12109 1028 aa9.93□□□□□ -0.82
APP-216ENST00000491395 SYN1P17600 705 aa9.93□□□□□ -0.82
APP-216ENST00000491395 RASA1P20936 1047 aa9.93□□□□□ -0.82
APP-216ENST00000491395 CNGA1P29973 690 aa9.93□□□□□ -0.82
APP-216ENST00000491395 SBK1Q52WX2 424 aa9.93□□□□□ -0.82
APP-216ENST00000491395 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
APP-216ENST00000491395 NCAPG2Q86XI2 1143 aa9.93□□□□□ -0.82
APP-216ENST00000491395 MB21D1Q8N884 522 aa9.93□□□□□ -0.82
APP-216ENST00000491395 SHCBP1Q8NEM2 672 aa9.93□□□□□ -0.82
APP-216ENST00000491395 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
APP-216ENST00000491395 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
APP-216ENST00000491395 ARPP21Q9UBL0 812 aaPredicted RBP9.93□□□□□ -0.82
APP-216ENST00000491395 PLXNB2O15031 1838 aa9.93□□□□□ -0.82
APP-216ENST00000491395 DDX60LQ5H9U9 1706 aaKnown RBP9.93□□□□□ -0.82
APP-216ENST00000491395 STRNO43815 780 aa9.92□□□□□ -0.82
APP-216ENST00000491395 PRDM1O75626 825 aa9.92□□□□□ -0.82
APP-216ENST00000491395 APPP05067 770 aa9.92□□□□□ -0.82
APP-216ENST00000491395 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
APP-216ENST00000491395 TDO2P48775 406 aa9.92□□□□□ -0.82
APP-216ENST00000491395 TMEM132BQ14DG7 1078 aa9.92□□□□□ -0.82
APP-216ENST00000491395 PRAMEF19Q5SWL8 479 aa9.92□□□□□ -0.82
APP-216ENST00000491395 FAM83BQ5T0W9 1011 aa9.92□□□□□ -0.82
APP-216ENST00000491395 PI4K2BQ8TCG2 481 aa9.92□□□□□ -0.82
APP-216ENST00000491395 NUP88Q99567 741 aaPredicted RBP9.92□□□□□ -0.82
APP-216ENST00000491395 MROH8Q9H579 483 aa9.92□□□□□ -0.82
APP-216ENST00000491395 MKNK2Q9HBH9 465 aa9.92□□□□□ -0.82
APP-216ENST00000491395 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
APP-216ENST00000491395 DDX20Q9UHI6 824 aaKnown RBP9.92□□□□□ -0.82
APP-216ENST00000491395 ADAMTS5Q9UNA0 930 aa9.92□□□□□ -0.82
APP-216ENST00000491395 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
APP-216ENST00000491395 PATL2C9JE40 543 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms