RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
RNF38-209ENST00000491349 TTC14Q96N46 770 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 NEK1Q96PY6 1258 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 WDR18Q9BV38 432 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 USP26Q9BXU7 913 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 ISY1Q9ULR0 285 aaKnown RBP9.75□□□□□ -0.85
RNF38-209ENST00000491349 SYNPO2Q9UMS6 1093 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 FZD1Q9UP38 647 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 SNCAIPQ9Y6H5 919 aa9.75□□□□□ -0.85
RNF38-209ENST00000491349 TRIM75PA6NK02 468 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 B4E1Z4 1266 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 IFIT3O14879 490 aaKnown RBP9.74□□□□□ -0.85
RNF38-209ENST00000491349 FOXP2O15409 715 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 FGRP09769 529 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 AKR1B1P15121 316 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 SPP2Q13103 211 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 SEPT2Q15019 361 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 FAM47AQ5JRC9 791 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
RNF38-209ENST00000491349 CYP4F22Q6NT55 531 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 BLOC1S2Q6QNY1 142 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 RASAL3Q86YV0 1011 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 TBC1D10CQ8IV04 446 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 LPAR1Q92633 364 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 CLMNQ96JQ2 1002 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 MTA3Q9BTC8 594 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 IL25Q9H293 177 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 DNAJC18Q9H819 358 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 KAT14Q9H8E8 782 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 TCP11L1Q9NUJ3 509 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 NYAP2Q9P242 653 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 PNMA3Q9UL41 463 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.74□□□□□ -0.85
RNF38-209ENST00000491349 CTDP1Q9Y5B0 961 aaPredicted RBP9.74□□□□□ -0.85
RNF38-209ENST00000491349 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
RNF38-209ENST00000491349 PLIN4Q96Q06 1357 aa9.74□□□□□ -0.85
RNF38-209ENST00000491349 CCDC69A6NI79 296 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 TOP1P11387 765 aaKnown RBP9.73□□□□□ -0.85
RNF38-209ENST00000491349 OSBPP22059 807 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 BACE1P56817 501 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 MAP2K1Q02750 393 aaPredicted RBP9.73□□□□□ -0.85
RNF38-209ENST00000491349 WTAPQ15007 396 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
RNF38-209ENST00000491349 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
RNF38-209ENST00000491349 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
RNF38-209ENST00000491349 MTMR4Q9NYA4 1195 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 CLIP2Q9UDT6 1046 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 AFG3L2Q9Y4W6 797 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 CYP46A1Q9Y6A2 500 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 NEDD4P46934 1319 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
RNF38-209ENST00000491349 CCL15-CCL14A0A0B4J2E2 113 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 IRF6O14896 467 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 IKQ13123 557 aaPredicted RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 MTMR2Q13614 643 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 ANKRD1Q15327 319 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 CCL15Q16663 113 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 TMEM67Q5HYA8 995 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 CATIPQ7Z7H3 387 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 CHMP4CQ96CF2 233 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 CEP95Q96GE4 821 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 C22orf23Q9BZE7 217 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 KIAA1683Q9H0B3 1180 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 ZCCHC17Q9NP64 241 aaKnown RBP9.72□□□□□ -0.85
RNF38-209ENST00000491349 ZSWIM5Q9P217 1185 aa9.72□□□□□ -0.85
RNF38-209ENST00000491349 PHIPQ8WWQ0 1821 aa9.71□□□□□ -0.85
RNF38-209ENST00000491349 A0A0G2JLL6 359 aaPredicted RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 WDR46O15213 610 aaKnown RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 CA12O43570 354 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 PRC1O43663 620 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 CALM1P0DP23 149 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 CALM2P0DP24 149 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 CALM3P0DP25 149 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 KIF5BP33176 963 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 VEGFBP49765 207 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 HMGCS2P54868 508 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 KIF23Q02241 960 aaPredicted RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 ZYXQ15942 572 aaKnown RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 PRRT2Q7Z6L0 340 aaPredicted RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 NAP1L2Q9ULW6 460 aaPredicted RBP9.71□□□□□ -0.86
RNF38-209ENST00000491349 KCNH4Q9UQ05 1017 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 TMX2Q9Y320 296 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 SNX14Q9Y5W7 946 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 TNKSO95271 1327 aa9.71□□□□□ -0.86
RNF38-209ENST00000491349 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms