RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 EYSQ5T1H1 3165 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 KBTBD13C9JR72 458 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 ITPRIPQ8IWB1 547 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.07■■□□□ 1.6
CLIP2-208ENST00000491075 SHCBP1Q8NEM2 672 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 TANGO6Q9C0B7 1094 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 ATP11BQ9Y2G3 1177 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 PARP14Q460N5 1801 aa25.07■■□□□ 1.6
CLIP2-208ENST00000491075 MAGEB6P1A0A0J9YX57 407 aa25.06■■□□□ 1.6
CLIP2-208ENST00000491075 GJC2Q5T442 439 aaPredicted RBP25.06■■□□□ 1.6
CLIP2-208ENST00000491075 ZNF697Q5TEC3 545 aa25.06■■□□□ 1.6
CLIP2-208ENST00000491075 ERC1Q8IUD2 1116 aa25.06■■□□□ 1.6
CLIP2-208ENST00000491075 CRNKL1Q9BZJ0 848 aaKnown RBP25.06■■□□□ 1.6
CLIP2-208ENST00000491075 SPATC1LQ9H0A9 340 aa25.06■■□□□ 1.6
CLIP2-208ENST00000491075 MPHOSPH10O00566 681 aaKnown RBP25.05■■□□□ 1.6
CLIP2-208ENST00000491075 SEPT4O43236 478 aa25.05■■□□□ 1.6
CLIP2-208ENST00000491075 TTF1Q15361 905 aaPredicted RBP25.05■■□□□ 1.6
CLIP2-208ENST00000491075 AACSQ86V21 672 aa25.05■■□□□ 1.6
CLIP2-208ENST00000491075 MB21D1Q8N884 522 aa25.05■■□□□ 1.6
CLIP2-208ENST00000491075 SLC5A4Q9NY91 659 aa25.05■■□□□ 1.6
CLIP2-208ENST00000491075 A0A1W2PRG0 241 aa25.04■■□□□ 1.6
CLIP2-208ENST00000491075 SLC39A5Q6ZMH5 540 aa25.04■■□□□ 1.6
CLIP2-208ENST00000491075 FAM161BQ96MY7 647 aa25.04■■□□□ 1.6
CLIP2-208ENST00000491075 COL25A1Q9BXS0 654 aaPredicted RBP25.04■■□□□ 1.6
CLIP2-208ENST00000491075 MCM9Q9NXL9 1143 aa25.04■■□□□ 1.6
CLIP2-208ENST00000491075 ERCC3P19447 782 aa25.03■■□□□ 1.6
CLIP2-208ENST00000491075 SNX17Q15036 470 aa25.03■■□□□ 1.6
CLIP2-208ENST00000491075 ABRAQ8N0Z2 381 aa25.03■■□□□ 1.6
CLIP2-208ENST00000491075 MROH8Q9H579 483 aa25.03■■□□□ 1.6
CLIP2-208ENST00000491075 ZNFX1Q9P2E3 1918 aaKnown RBP25.03■■□□□ 1.6
CLIP2-208ENST00000491075 PDE6AP16499 860 aa25.02■■□□□ 1.6
CLIP2-208ENST00000491075 SLC9C2Q5TAH2 1124 aa25.02■■□□□ 1.6
CLIP2-208ENST00000491075 CEP85Q6P2H3 762 aa25.02■■□□□ 1.6
CLIP2-208ENST00000491075 TMEM179Q6ZVK1 233 aa25.02■■□□□ 1.6
CLIP2-208ENST00000491075 COL11A1P12107 1806 aaPredicted RBP25.02■■□□□ 1.6
CLIP2-208ENST00000491075 COBLO75128 1261 aa25.01■■□□□ 1.59
CLIP2-208ENST00000491075 ANO1Q5XXA6 986 aa25.01■■□□□ 1.59
CLIP2-208ENST00000491075 PRDM5Q9NQX1 630 aaPredicted RBP25.01■■□□□ 1.59
CLIP2-208ENST00000491075 SWAP70Q9UH65 585 aa25.01■■□□□ 1.59
CLIP2-208ENST00000491075 EXOC6BQ9Y2D4 811 aa25.01■■□□□ 1.59
CLIP2-208ENST00000491075 RLBP1P12271 317 aa25■■□□□ 1.59
CLIP2-208ENST00000491075 SHHQ15465 462 aa25■■□□□ 1.59
CLIP2-208ENST00000491075 TRIM60Q495X7 471 aa25■■□□□ 1.59
CLIP2-208ENST00000491075 SH2D4AQ9H788 454 aa25■■□□□ 1.59
CLIP2-208ENST00000491075 PLXNA1Q9UIW2 1896 aa25■■□□□ 1.59
CLIP2-208ENST00000491075 FLOT1O75955 427 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 DSG3P32926 999 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 EVX2Q03828 476 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 PLS1Q14651 629 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 HSP90AB4PQ58FF6 505 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 C1orf53Q5VUE5 145 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 NCAPG2Q86XI2 1143 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 PRUNE2Q8WUY3 3088 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 ARHGEF10LQ9HCE6 1279 aa24.99■■□□□ 1.59
CLIP2-208ENST00000491075 DCP1AQ9NPI6 582 aaPredicted RBP24.99■■□□□ 1.59
CLIP2-208ENST00000491075 BAZ2AQ9UIF9 1905 aaKnown RBP24.99■■□□□ 1.59
CLIP2-208ENST00000491075 ZNF532Q9HCE3 1301 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 MYCNP04198 464 aaPredicted RBP24.98■■□□□ 1.59
CLIP2-208ENST00000491075 LRRC41Q15345 812 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 KIAA1755Q5JYT7 1200 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 SDR42E1Q8WUS8 393 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 BADQ92934 168 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 MAML3Q96JK9 1138 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 PDLIM7Q9NR12 457 aa24.98■■□□□ 1.59
CLIP2-208ENST00000491075 SMCHD1A6NHR9 2005 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 FCER1AP12319 257 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 ADCYAP1R1P41586 468 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 C9orf50Q5SZB4 431 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 SLC44A5Q8NCS7 719 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 ATG4CQ96DT6 458 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 IL1RAPL2Q9NP60 686 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 NRBP1Q9UHY1 535 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 TMX2Q9Y320 296 aa24.97■■□□□ 1.59
CLIP2-208ENST00000491075 TCRBV5S4A2TA0A5A2 114 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 SMAD3P84022 425 aaKnown RBP24.96■■□□□ 1.59
CLIP2-208ENST00000491075 ICA1Q05084 483 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 FAM47AQ5JRC9 791 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 PRAMEF19Q5SWL8 479 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 LCORLQ8N3X6 602 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.96■■□□□ 1.59
CLIP2-208ENST00000491075 CDX2Q99626 313 aaPredicted RBP24.96■■□□□ 1.59
CLIP2-208ENST00000491075 VCPKMTQ9H867 229 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 VCANP13611 3396 aa24.96■■□□□ 1.59
CLIP2-208ENST00000491075 WDR46O15213 610 aaKnown RBP24.95■■□□□ 1.58
CLIP2-208ENST00000491075 SLC25A27O95847 323 aa24.95■■□□□ 1.58
CLIP2-208ENST00000491075 CYP2D6P10635 497 aa24.95■■□□□ 1.58
CLIP2-208ENST00000491075 SPICE1Q8N0Z3 855 aa24.95■■□□□ 1.58
CLIP2-208ENST00000491075 RHPN1Q8TCX5 695 aa24.95■■□□□ 1.58
CLIP2-208ENST00000491075 FERMT2Q96AC1 680 aa24.95■■□□□ 1.58
CLIP2-208ENST00000491075 MYH7P12883 1935 aa24.94■■□□□ 1.58
CLIP2-208ENST00000491075 GOLIM4O00461 696 aa24.94■■□□□ 1.58
CLIP2-208ENST00000491075 CLEC10AQ8IUN9 316 aa24.94■■□□□ 1.58
CLIP2-208ENST00000491075 CLASRPQ8N2M8 674 aaKnown RBP24.94■■□□□ 1.58
CLIP2-208ENST00000491075 DNAJC2Q99543 621 aaKnown RBP24.94■■□□□ 1.58
CLIP2-208ENST00000491075 SEMA6BQ9H3T3 888 aa24.94■■□□□ 1.58
CLIP2-208ENST00000491075 CDH23Q9H251 3354 aa24.94■■□□□ 1.58
CLIP2-208ENST00000491075 ROBO3Q96MS0 1386 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 TRIM43BA6NCK2 446 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 RARBP10826 455 aa24.93■■□□□ 1.58
CLIP2-208ENST00000491075 AKR1B1P15121 316 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms