RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 GNL3LQ9NVN8 582 aaKnown RBP11.47□□□□□ -0.57
BRD9-209ENST00000490814 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 CCDC151A5D8V7 595 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 SH2B2O14492 632 aaPredicted RBP11.47□□□□□ -0.57
BRD9-209ENST00000490814 C21orf2O43822 256 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 CUTAO60888 179 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 MTF1Q14872 753 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.574e-9■■■■□ 21.4
BRD9-209ENST00000490814 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
BRD9-209ENST00000490814 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
BRD9-209ENST00000490814 PDE6AP16499 860 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 PAX7P23759 505 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 ZNF569Q5MCW4 686 aa11.47□□□□□ -0.57
BRD9-209ENST00000490814 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.57
BRD9-209ENST00000490814 FMR1Q06787 632 aaKnown RBP eCLIP11.46□□□□□ -0.57
BRD9-209ENST00000490814 BRD3Q15059 726 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 MFSD6Q6ZSS7 791 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
BRD9-209ENST00000490814 ABCB6Q9NP58 842 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 ZSWIM5Q9P217 1185 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 MAN1B1Q9UKM7 699 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 RGPD5Q99666 1765 aa11.46□□□□□ -0.57
BRD9-209ENST00000490814 PRKAB2O43741 272 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 KIF5CO60282 957 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 ELF1P32519 619 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 ADD2P35612 726 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 RTN1Q16799 776 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 RESP18Q5W5W9 173 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 USP49Q70CQ1 688 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 NOSTRINQ8IVI9 506 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 UBN2Q6ZU65 1347 aa11.46□□□□□ -0.58
BRD9-209ENST00000490814 PPP6R2O75170 966 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 ERLIN2O94905 339 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 HSD3B7Q9H2F3 369 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 ABCF2Q9UG63 623 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 PCDHB6Q9Y5E3 794 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 SLIT3O75094 1523 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 HNRNPH1P31943 449 aaKnown RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 PTPAQ15257 358 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 JPH2Q9BR39 696 aaPredicted RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 VEZTQ9HBM0 779 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 ALS2Q96Q42 1657 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 ANKRD33BA6NCL7 494 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
BRD9-209ENST00000490814 CCDC175P0C221 793 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 WTAPQ15007 396 aa11.45□□□□□ -0.58
BRD9-209ENST00000490814 MARF1Q9Y4F3 1742 aaKnown RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 BMP6P22004 513 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 CCT6AP40227 531 aaKnown RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 NEDD9Q14511 834 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 SRGAP1Q7Z6B7 1085 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 FCHSD1Q86WN1 690 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 RABEP2Q9H5N1 569 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 LRP2BPQ9P2M1 347 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 SLC4A4Q9Y6R1 1079 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 ERVV-2B6SEH9 535 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 RPS6KA5O75582 802 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 STARD3NLO95772 234 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 HLFQ16534 295 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 MRPL44Q9H9J2 332 aaKnown RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 STX10O60499 249 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 PRDM1O75626 825 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 WASF1Q92558 559 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 PNKPQ96T60 521 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
BRD9-209ENST00000490814 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
BRD9-209ENST00000490814 TEX33O43247 280 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 ADCY2Q08462 1091 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 IFNL3Q8IZI9 196 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 CEP112Q8N8E3 955 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 IGSF22Q8N9C0 903 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 N4BP2L2Q92802 583 aaPredicted RBP11.43□□□□□ -0.58
BRD9-209ENST00000490814 MAP3K14Q99558 947 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 ACBD3Q9H3P7 528 aa11.43□□□□□ -0.58
BRD9-209ENST00000490814 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms