RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SEC62Q99442 399 aaKnown RBP20.82■□□□□ 0.92
SEC13-218ENST00000490283 VCPKMTQ9H867 229 aa20.82■□□□□ 0.92
SEC13-218ENST00000490283 GOPCQ9HD26 462 aa20.82■□□□□ 0.92
SEC13-218ENST00000490283 KIAA0100Q14667 2235 aaKnown RBP20.82■□□□□ 0.92
SEC13-218ENST00000490283 SPDYE16A6NNV3 312 aaPredicted RBP20.81■□□□□ 0.92
SEC13-218ENST00000490283 TRIM6-TRIM34B2RNG4 842 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 PEX10O60683 326 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 HMGCRP04035 888 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 GJB1P08034 283 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 EEF2P13639 858 aaKnown RBP20.81■□□□□ 0.92
SEC13-218ENST00000490283 WDR78Q5VTH9 848 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 PLEKHH3Q7Z736 793 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 CHD1LQ86WJ1 897 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
SEC13-218ENST00000490283 ZNF444Q8N0Y2 327 aaPredicted RBP20.81■□□□□ 0.92
SEC13-218ENST00000490283 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
SEC13-218ENST00000490283 RAD21O60216 631 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 PDE4BQ07343 736 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 Q3C1V9 767 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 GPR142Q7Z601 462 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 TRMT44Q8IYL2 757 aaKnown RBP20.8■□□□□ 0.92
SEC13-218ENST00000490283 SPICE1Q8N0Z3 855 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 PORCNQ9H237 461 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 GJD2Q9UKL4 321 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 IVNS1ABPQ9Y6Y0 642 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 MYH8P13535 1937 aa20.8■□□□□ 0.92
SEC13-218ENST00000490283 FLOT1O75955 427 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 IGHDP01880 384 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 CYP2B6P20813 491 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 RASA1P20936 1047 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 RGS2P41220 211 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 GJA8P48165 433 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 NUCB1Q02818 461 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 PRPF38BQ5VTL8 546 aaKnown RBP20.79■□□□□ 0.92
SEC13-218ENST00000490283 MB21D1Q8N884 522 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 UNC93B1Q9H1C4 597 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 HELLSQ9NRZ9 838 aa20.79■□□□□ 0.92
SEC13-218ENST00000490283 XRCC5P13010 732 aaKnown RBP20.78■□□□□ 0.92
SEC13-218ENST00000490283 CAPN2P17655 700 aa20.78■□□□□ 0.92
SEC13-218ENST00000490283 SIAH1Q8IUQ4 282 aa20.78■□□□□ 0.92
SEC13-218ENST00000490283 RILPL2Q969X0 211 aa20.78■□□□□ 0.92
SEC13-218ENST00000490283 CNMDO75829 334 aa20.77■□□□□ 0.92
SEC13-218ENST00000490283 ZKSCAN1P17029 563 aaPredicted RBP20.77■□□□□ 0.92
SEC13-218ENST00000490283 PPARAQ07869 468 aa20.77■□□□□ 0.92
SEC13-218ENST00000490283 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
SEC13-218ENST00000490283 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
SEC13-218ENST00000490283 U2AF1L4Q8WU68 220 aaKnown RBP20.77■□□□□ 0.92
SEC13-218ENST00000490283 BTBD7Q9P203 1132 aa20.77■□□□□ 0.92
SEC13-218ENST00000490283 PRDM1O75626 825 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 TSPY3P0CV98 308 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 TSPY8P0CW00 308 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 DSG3P32926 999 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 KIAA1755Q5JYT7 1200 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 APBA2Q99767 749 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 NYAP2Q9P242 653 aa20.76■□□□□ 0.91
SEC13-218ENST00000490283 SGPL1O95470 568 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 MAP2K5Q13163 448 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 PLS1Q14651 629 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 MCMDC2Q4G0Z9 681 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 POTEEQ6S8J3 1075 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 DEFB118Q96PH6 123 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.75■□□□□ 0.91
SEC13-218ENST00000490283 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
SEC13-218ENST00000490283 PDE4DIPQ5VU43 2346 aa20.75■□□□□ 0.91
SEC13-218ENST00000490283 SLC15A5A6NIM6 579 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 TFRCP02786 760 aaKnown RBP20.74■□□□□ 0.91
SEC13-218ENST00000490283 MFAP1P55081 439 aaKnown RBP20.74■□□□□ 0.91
SEC13-218ENST00000490283 PPP4R3BQ5MIZ7 849 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 MORN1Q5T089 497 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 PLEKHM2Q8IWE5 1019 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 TRIB2Q92519 343 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 SHISA4Q96DD7 197 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 ATG4CQ96DT6 458 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.74■□□□□ 0.91
SEC13-218ENST00000490283 SPATC1LQ9H0A9 340 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 OSBPL3Q9H4L5 887 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 CLIP2Q9UDT6 1046 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 RPTORQ8N122 1335 aa20.74■□□□□ 0.91
SEC13-218ENST00000490283 TTLL1O95922 423 aa20.73■□□□□ 0.91
SEC13-218ENST00000490283 PTPREP23469 700 aa20.73■□□□□ 0.91
SEC13-218ENST00000490283 FAM83BQ5T0W9 1011 aa20.73■□□□□ 0.91
SEC13-218ENST00000490283 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
SEC13-218ENST00000490283 FAM227BQ96M60 508 aa20.73■□□□□ 0.91
SEC13-218ENST00000490283 MOV10L1Q9BXT6 1211 aaKnown RBP20.73■□□□□ 0.91
SEC13-218ENST00000490283 PAK6Q9NQU5 681 aaPredicted RBP20.73■□□□□ 0.91
SEC13-218ENST00000490283 CENPFP49454 3210 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 A0A0D9SFI3 127 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 NMIQ13287 307 aaPredicted RBP20.72■□□□□ 0.91
SEC13-218ENST00000490283 NEDD1Q8NHV4 660 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 USP6NLQ92738 828 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 CEP95Q96GE4 821 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 MROH8Q9H579 483 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 MTMR4Q9NYA4 1195 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
SEC13-218ENST00000490283 IGKV6D-41A0A0C4DH26 115 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 TSPY2A6NKD2 308 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 F5H6K3 240 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 HIP1O00291 1037 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 STRNO43815 780 aa20.71■□□□□ 0.91
SEC13-218ENST00000490283 FARP2O94887 1054 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms