RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 XRN1Q8IZH2 1706 aaKnown RBP4.55□□□□□ -1.68
CRNKL1-203ENST00000490258 CCDC144AA2RUR9 1427 aa4.55□□□□□ -1.68
CRNKL1-203ENST00000490258 INSRP06213 1382 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 USP32Q8NFA0 1604 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 NFIBO00712 420 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 ZNF862O60290 1169 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 KRT1P04264 644 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 ADH5P11766 374 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 DRD2P14416 443 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 MAOBP27338 520 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 BNIP3Q12983 259 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 CCDC184Q52MB2 194 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 CDPF1Q6NVV7 123 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 SEZ6L2Q6UXD5 910 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 PI4K2BQ8TCG2 481 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 ANKRD24Q8TF21 1146 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 MISP3Q96FF7 219 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 USP26Q9BXU7 913 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 OSBPL7Q9BZF2 842 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 EHD4Q9H223 541 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 TULP4Q9NRJ4 1543 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 MARF1Q9Y4F3 1742 aaKnown RBP4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 TOPAZ1Q8N9V7 1692 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 PRAG1Q86YV5 1406 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 ALKQ9UM73 1620 aa4.54□□□□□ -1.68
CRNKL1-203ENST00000490258 LRPPRCP42704 1394 aaKnown RBP4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 ADGRB1O14514 1584 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 SYNGAP1Q96PV0 1343 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 PNMA6FA0A0J9YX94 578 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 TCERG1O14776 1098 aaKnown RBP4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 CYP27A1Q02318 531 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 GSTM4Q03013 218 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 KCNMB1Q16558 191 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 C12orf50Q8NA57 414 aaPredicted RBP4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 FBLIM1Q8WUP2 373 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 WDR89Q96FK6 387 aaPredicted RBP4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 POLR3GLQ9BT43 218 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 WDR18Q9BV38 432 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 BCO2Q9BYV7 579 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 WWC3Q9ULE0 1092 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 ACTL7BQ9Y614 415 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 A2ML1A8K2U0 1454 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 PTPRTO14522 1441 aa4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 CHD2O14647 1828 aaKnown RBP4.53□□□□□ -1.68
CRNKL1-203ENST00000490258 AKAP12Q02952 1782 aa4.53□□□□□ -1.69
CRNKL1-203ENST00000490258 KANK1Q14678 1352 aa4.53□□□□□ -1.69
CRNKL1-203ENST00000490258 KTN1Q86UP2 1357 aaKnown RBP4.53□□□□□ -1.69
CRNKL1-203ENST00000490258 KIF7Q2M1P5 1343 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 ADGRF5Q8IZF2 1346 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 NPIPB6E9PJ23 425 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 PPM1GO15355 546 aaPredicted RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 P4HBP07237 508 aaKnown RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 CD8BP10966 210 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 MAPK1P28482 360 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 USP11P51784 963 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 SOX4Q06945 474 aaPredicted RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 ZNF252P-AS1Q0IIN9 211 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 EXOSC6Q5RKV6 272 aaKnown RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 RASIP1Q5U651 963 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 DNAJC14Q6Y2X3 702 aaPredicted RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 FLAD1Q8NFF5 587 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 CCDC136Q96JN2 1154 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 CCDC86Q9H6F5 360 aaKnown RBP4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 ACSS3Q9H6R3 686 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 MRS2Q9HD23 443 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 FAM105AQ9NUU6 356 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 UHRF1BP1Q6BDS2 1440 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 ANKRD26Q9UPS8 1709 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 TNRQ92752 1358 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 PLEKHH1Q9ULM0 1364 aa4.52□□□□□ -1.69
CRNKL1-203ENST00000490258 MYOM2P54296 1465 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 RGPD2P0DJD1 1756 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 ARL4DP49703 201 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 HSPA2P54652 639 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 SAFB2Q14151 953 aaKnown RBP eCLIP4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 POU4F3Q15319 338 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 NUTM2GQ5VZR2 741 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 NXPE4Q6UWF7 544 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 FBF1Q8TES7 1133 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 BORCS6Q96GS4 357 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 LIN37Q96GY3 246 aaPredicted RBP4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 RNF19AQ9NV58 838 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 BIN2Q9UBW5 565 aaPredicted RBP4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 PPP1R9AQ9ULJ8 1098 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 TRAK1Q9UPV9 953 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 RIMS2Q9UQ26 1411 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 FMN2Q9NZ56 1722 aa4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 ROCK2O75116 1388 aaKnown RBP4.51□□□□□ -1.69
CRNKL1-203ENST00000490258 RGPD5Q99666 1765 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 MON2Q7Z3U7 1717 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 NRKQ7Z2Y5 1582 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 ZFYVE9O95405 1425 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 PTPRUQ92729 1446 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 ENC1O14682 589 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 TMPRSS2O15393 492 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 DYNC1LI2O43237 492 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms