RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SAMM50Q9Y512 469 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 CBX4O00257 560 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 PDE2AO00408 941 aaPredicted RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 CBFA2T2O43439 604 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 DLX3O60479 287 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 HSP90AA2PQ14568 343 aaPredicted RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 HYIQ5T013 277 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 LVRNQ6Q4G3 990 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 DTHD1Q6ZMT9 781 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 RUFY4Q6ZNE9 571 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 NLRC3Q7RTR2 1065 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 SIAH1Q8IUQ4 282 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 FBXL18Q96ME1 805 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ISCA1Q9BUE6 129 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 COLEC11Q9BWP8 271 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 INO80BQ9C086 356 aaPredicted RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ANKRD6Q9Y2G4 727 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ZNF281Q9Y2X9 895 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA12O60330 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 HTR3BO95264 441 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 DDIT3P35638 169 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PLAURQ03405 335 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 ZRSR2Q15696 482 aaKnown RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 SPRED3Q2MJR0 410 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 SYCP2LQ5T4T6 812 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 OVOS1Q6IE37 1185 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 C20orf204Q6ZNR8 217 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 ANAPC16Q96DE5 110 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 POP1Q99575 1024 aaKnown RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 ZNF277Q9NRM2 450 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 FBXO9Q9UK97 447 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 HIF3AQ9Y2N7 669 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA9Q9Y5G4 932 aaKnown RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA8Q9Y5G5 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA7Q9Y5G6 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA6Q9Y5G7 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA3Q9Y5H0 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 SLC35F4A4IF30 521 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 FRS3O43559 492 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PRKD3O94806 890 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 PABPC1P11940 636 aaKnown RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 CD53P19397 219 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 IGFALSP35858 605 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 LACTBP83111 547 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 C22orf34Q6ZV56 151 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 SRGAP1Q7Z6B7 1085 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 CLEC4MQ9H2X3 399 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 RSF1Q96T23 1441 aaPredicted RBP3.87□□□□□ -1.79
UBXN4-208ENST00000490163 ATAD2BQ9ULI0 1458 aa3.87□□□□□ -1.79
UBXN4-208ENST00000490163 ABHD14A-ACY1A0A1B0GW23 586 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 UBOX5O94941 541 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 ZBED1O96006 694 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 F11P03951 625 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 MYCLP1P12525 358 aaPredicted RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 AGFG1P52594 562 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 SNX17Q15036 470 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 LLGL2Q6P1M3 1020 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 CCDC81Q6ZN84 652 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 Q6ZNB5 142 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 NAA15Q9BXJ9 866 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 CCDC189A1A4V9 331 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 A6NNZ2 444 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 ZIC2O95409 532 aaPredicted RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 CYP2C19P33261 490 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 SLC7A5Q01650 507 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 ZC3H12AQ5D1E8 599 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 FAM209AQ5JX71 171 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 TMEM214Q6NUQ4 689 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 LRFN4Q6PJG9 635 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 C16orf54Q6UWD8 224 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 C1orf162Q8NEQ5 155 aaPredicted RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 ANTXR1Q9H6X2 564 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 TRMT13Q9NUP7 481 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 SFMBT1Q9UHJ3 866 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 TGM5O43548 720 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 SIN3BO75182 1162 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 PLA2G4AP47712 749 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 GTF2A2P52657 109 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 GFRA1P56159 465 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 ERVK-24P63145 666 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 RGL3Q3MIN7 710 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 MINDY4Q4G0A6 757 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 OVCH1Q7RTY7 1134 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 MAP4K3Q8IVH8 894 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 SMC1BQ8NDV3 1235 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 GRIN3AQ8TCU5 1115 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBXN4-208ENST00000490163 LUZP4Q9P127 313 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 WDR97A6NE52 1622 aa3.86□□□□□ -1.79
UBXN4-208ENST00000490163 RNF40O75150 1001 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 TUSC2O75896 110 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ACPPP15309 386 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 MCM4P33991 863 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 CTSOP43234 321 aaPredicted RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 PKN3Q6P5Z2 889 aa3.85□□□□□ -1.79
UBXN4-208ENST00000490163 DHX32Q7L7V1 743 aaKnown RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 NANOS1Q8WY41 292 aaKnown RBP3.85□□□□□ -1.79
UBXN4-208ENST00000490163 ELAC2Q9BQ52 826 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms