RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ECM29Q5VYK3 1845 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 CUL4BQ13620 913 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 TYW1BQ6NUM6 668 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 REXO1L1PQ8IX06 675 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 ARHGEF1Q92888 912 aaKnown RBP17.87■□□□□ 0.45
BRD9-208ENST00000489816 VPS16Q9H269 839 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 CNTNAP5Q8WYK1 1306 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 SCG2P13521 617 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 DHX8Q14562 1220 aaKnown RBP17.87■□□□□ 0.45
BRD9-208ENST00000489816 TPTE2Q6XPS3 522 aa17.87■□□□□ 0.45
BRD9-208ENST00000489816 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
BRD9-208ENST00000489816 FAM205AQ6ZU69 1335 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 ZSCAN20P17040 1043 aaPredicted RBP17.86■□□□□ 0.45
BRD9-208ENST00000489816 PLCD1P51178 756 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 TRIM65Q6PJ69 517 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
BRD9-208ENST00000489816 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
BRD9-208ENST00000489816 ZNF18P17022 549 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 ARHGAP29Q52LW3 1261 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 RRAGBQ5VZM2 374 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 HEATR3Q7Z4Q2 680 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 ENOX1Q8TC92 643 aaKnown RBP17.86■□□□□ 0.45
BRD9-208ENST00000489816 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
BRD9-208ENST00000489816 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
BRD9-208ENST00000489816 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 SLFN14P0C7P3 912 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 TMEM139Q8IV31 216 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 ERO1AQ96HE7 468 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 CGNQ9P2M7 1197 aaKnown RBP17.85■□□□□ 0.45
BRD9-208ENST00000489816 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
BRD9-208ENST00000489816 RBL2Q08999 1139 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 PNMA1Q8ND90 353 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 UIMC1Q96RL1 719 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 MTRQ99707 1265 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 UTRNP46939 3433 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 TFRCP02786 760 aaKnown RBP17.85■□□□□ 0.45
BRD9-208ENST00000489816 GDAQ9Y2T3 454 aa17.85■□□□□ 0.45
BRD9-208ENST00000489816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.85■□□□□ 0.453e-7■■■■■ 40.8
BRD9-208ENST00000489816 SYNRGQ9UMZ2 1314 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
BRD9-208ENST00000489816 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
BRD9-208ENST00000489816 MNS1Q8NEH6 495 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.456e-12■□□□□ 9.7
BRD9-208ENST00000489816 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
BRD9-208ENST00000489816 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
BRD9-208ENST00000489816 MYH6P13533 1939 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 INF2Q27J81 1249 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 XDHP47989 1333 aa17.84■□□□□ 0.45
BRD9-208ENST00000489816 GPIHBP1Q8IV16 184 aa17.83■□□□□ 0.45
BRD9-208ENST00000489816 RBM28Q9NW13 759 aaKnown RBP17.83■□□□□ 0.45
BRD9-208ENST00000489816 NARFQ9UHQ1 456 aa17.83■□□□□ 0.45
BRD9-208ENST00000489816 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
BRD9-208ENST00000489816 TSPY3P0CV98 308 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 TSPY8P0CW00 308 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
BRD9-208ENST00000489816 TAB2Q9NYJ8 693 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 DACH1Q9UI36 760 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 LRP5O75197 1615 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 TRIM49BA6NDI0 452 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 ABL1P00519 1130 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 RFC4P35249 363 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 NT5DC1Q5TFE4 455 aa17.83■□□□□ 0.44
BRD9-208ENST00000489816 CASP14P31944 242 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 KANK3Q6NY19 840 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 TNFRSF25Q93038 417 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 PPP1R3GB7ZBB8 358 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 ARHGAP6O43182 974 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 ERCC3P19447 782 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
BRD9-208ENST00000489816 NR1I3Q14994 352 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 ZNF397Q8NF99 534 aaPredicted RBP17.82■□□□□ 0.44
BRD9-208ENST00000489816 UBXN4Q92575 508 aa17.82■□□□□ 0.44
BRD9-208ENST00000489816 F8W031 263 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 TM4SF1P30408 202 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 PPFIBP1Q86W92 1011 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 ZNF446Q9NWS9 450 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 RNF225M0QZC1 329 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 N4BP3O15049 544 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 CALM1P0DP23 149 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 CALM2P0DP24 149 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 CALM3P0DP25 149 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 ZNF444Q8N0Y2 327 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 CACNA1SQ13698 1873 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 DOCK2Q92608 1830 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 CYTH3O43739 400 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 DDAH1O94760 285 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 SEC31AO94979 1220 aaKnown RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 SLURP2P0DP57 97 aa17.81■□□□□ 0.44
BRD9-208ENST00000489816 ATP2C1P98194 919 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 TBX2Q13207 712 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 PFKFB3Q16875 520 aaPredicted RBP17.81■□□□□ 0.44
BRD9-208ENST00000489816 SPATA1Q5VX52 437 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms