RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 RPAP2Q8IXW5 612 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 NPLOC4Q8TAT6 608 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 SYMPKQ92797 1274 aaKnown RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 C11orf49Q9H6J7 331 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 RPAP3Q9H6T3 665 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 ARMT1Q9H993 441 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-206ENST00000489451 ADD2P35612 726 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 RGS2P41220 211 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 USP14P54578 494 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 MAP2K5Q13163 448 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 C20orf194Q5TEA3 1177 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 CRNKL1Q9BZJ0 848 aaKnown RBP14.25□□□□□ -0.13
ACTN4-206ENST00000489451 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 MCM9Q9NXL9 1143 aa14.25□□□□□ -0.13
ACTN4-206ENST00000489451 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-206ENST00000489451 COL11A1P12107 1806 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-206ENST00000489451 LAMA2P24043 3122 aaKnown RBP14.24□□□□□ -0.13
ACTN4-206ENST00000489451 CYP2D7A0A087X1C5 515 aa14.24□□□□□ -0.13
ACTN4-206ENST00000489451 SYN1P17600 705 aa14.24□□□□□ -0.13
ACTN4-206ENST00000489451 PTPREP23469 700 aa14.24□□□□□ -0.13
ACTN4-206ENST00000489451 GRB14Q14449 540 aa14.24□□□□□ -0.13
ACTN4-206ENST00000489451 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
ACTN4-206ENST00000489451 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 MBD4O95243 580 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 HOXC6P09630 235 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 IFIT2P09913 472 aaKnown RBP14.23□□□□□ -0.13
ACTN4-206ENST00000489451 AKR1B1P15121 316 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 ATP5JP18859 108 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
ACTN4-206ENST00000489451 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
ACTN4-206ENST00000489451 TRPV1Q8NER1 839 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 GUCD1Q96NT3 240 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 HAUS7Q99871 368 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 PAG1Q9NWQ8 432 aa14.23□□□□□ -0.13
ACTN4-206ENST00000489451 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
ACTN4-206ENST00000489451 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
ACTN4-206ENST00000489451 LRRC26Q2I0M4 334 aa14.22□□□□□ -0.13
ACTN4-206ENST00000489451 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
ACTN4-206ENST00000489451 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
ACTN4-206ENST00000489451 MPHOSPH10O00566 681 aaKnown RBP14.21□□□□□ -0.13
ACTN4-206ENST00000489451 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.13
ACTN4-206ENST00000489451 HMMRO75330 724 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 MS4A1P11836 297 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 CYP2C19P33261 490 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 MAGEA10P43363 369 aaPredicted RBP14.21□□□□□ -0.13
ACTN4-206ENST00000489451 CCNA1P78396 465 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 WDR78Q5VTH9 848 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 TMEM179Q6ZVK1 233 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 CCAR1Q8IX12 1150 aaKnown RBP14.21□□□□□ -0.13
ACTN4-206ENST00000489451 FAM161BQ96MY7 647 aa14.21□□□□□ -0.13
ACTN4-206ENST00000489451 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 ZNFX1Q9P2E3 1918 aaKnown RBP14.2□□□□□ -0.14
ACTN4-206ENST00000489451 CYBAP13498 195 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 COG2Q14746 738 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.2□□□□□ -0.14
ACTN4-206ENST00000489451 UBE2OQ9C0C9 1292 aaKnown RBP14.2□□□□□ -0.14
ACTN4-206ENST00000489451 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 PUS7LQ9H0K6 701 aaKnown RBP14.2□□□□□ -0.14
ACTN4-206ENST00000489451 RCAN3Q9UKA8 241 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
ACTN4-206ENST00000489451 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 USP17L12C9JPN9 530 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 USP17L21D6R901 530 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 TNFRSF10AO00220 468 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 COBLO75128 1261 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 ERCC3P19447 782 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 ADORA2AP29274 412 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 DSG3P32926 999 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 CDK8P49336 464 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 UBE3CQ15386 1083 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 C16orf86Q6ZW13 317 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 SPICE1Q8N0Z3 855 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 MAFAQ8NHW3 353 aaPredicted RBP14.19□□□□□ -0.14
ACTN4-206ENST00000489451 ATG4CQ96DT6 458 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 ATP8A2Q9NTI2 1148 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
ACTN4-206ENST00000489451 DDX20Q9UHI6 824 aaKnown RBP14.19□□□□□ -0.14
ACTN4-206ENST00000489451 ICA1Q05084 483 aa14.18□□□□□ -0.14
ACTN4-206ENST00000489451 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
ACTN4-206ENST00000489451 CTR9Q6PD62 1173 aa14.18□□□□□ -0.14
ACTN4-206ENST00000489451 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
ACTN4-206ENST00000489451 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
ACTN4-206ENST00000489451 PLXNA1Q9UIW2 1896 aa14.17□□□□□ -0.14
ACTN4-206ENST00000489451 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
ACTN4-206ENST00000489451 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
ACTN4-206ENST00000489451 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
ACTN4-206ENST00000489451 LPAR1Q92633 364 aa14.17□□□□□ -0.14
ACTN4-206ENST00000489451 CWC22Q9HCG8 908 aaKnown RBP14.17□□□□□ -0.14
ACTN4-206ENST00000489451 ADAMTS5Q9UNA0 930 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms