RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 NR5A1Q13285 461 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 LONRF3Q496Y0 759 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 TRIML1Q8N9V2 468 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 ERCC4Q92889 916 aaPredicted RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 NRBP1Q9UHY1 535 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 PCDHB6Q9Y5E3 794 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 CNTNAP5Q8WYK1 1306 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 DYNC1I1O14576 645 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 PLEKHA8P1O95397 391 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 CALML3P27482 149 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 NCAPHQ15003 741 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 PFKFB3Q16875 520 aaPredicted RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 RCSD1Q6JBY9 416 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
CSMD2-209ENST00000489419 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 TBC1D22AQ8WUA7 517 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 TNFRSF25Q93038 417 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 CD209Q9NNX6 404 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 VPS54Q9P1Q0 977 aa10.11□□□□□ -0.79
CSMD2-209ENST00000489419 MYH6P13533 1939 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 SCG2P13521 617 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 GPSM2P81274 684 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 UBR3Q6ZT12 1888 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 CACTINQ8WUQ7 758 aaKnown RBP10.1□□□□□ -0.79
CSMD2-209ENST00000489419 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 DACH1Q9UI36 760 aa10.1□□□□□ -0.79
CSMD2-209ENST00000489419 GPR75-ASB3A0A0A6YYF3 556 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 USP17L8P0C7I0 530 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 CYP2D6P10635 497 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 SARSP49591 514 aaKnown RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 TFAP4Q01664 338 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 MYL5Q02045 173 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 MLKLQ8NB16 471 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 MYRIPQ8NFW9 859 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 SHISA4Q96DD7 197 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 PYM1Q9BRP8 204 aaKnown RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 BIN1O00499 593 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 CBFA2T2O43439 604 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 UFL1O94874 794 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 PNOCQ13519 176 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 POSTNQ15063 836 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 NPY5RQ15761 445 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 GALNT17Q6IS24 598 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 ZNF444Q8N0Y2 327 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 SH3RF3Q8TEJ3 882 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 ZNF526Q8TF50 670 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 RTFDC1Q9BY42 306 aaPredicted RBP10.09□□□□□ -0.79
CSMD2-209ENST00000489419 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 SUGT1Q9Y2Z0 365 aa10.09□□□□□ -0.79
CSMD2-209ENST00000489419 A0A087WWV3 80 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 UQCRHLA0A096LP55 91 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 POLR2DO15514 142 aaKnown RBP10.08□□□□□ -0.8
CSMD2-209ENST00000489419 UQCRHP07919 91 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSMD2-209ENST00000489419 GRM4Q14833 912 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 SPATA20Q8TB22 786 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 QTRT2Q9H974 415 aaKnown RBP10.08□□□□□ -0.8
CSMD2-209ENST00000489419 IL17RBQ9NRM6 502 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 FAM205AQ6ZU69 1335 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 NMT2O60551 498 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 LRMPQ12912 555 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 CCDC150Q8NCX0 1101 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 PNMA1Q8ND90 353 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 CSRNP2Q9H175 543 aa10.08□□□□□ -0.8
CSMD2-209ENST00000489419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
CSMD2-209ENST00000489419 MAFGO15525 162 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
CSMD2-209ENST00000489419 SMC2O95347 1197 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 SLFN14P0C7P3 912 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 SMARCA1P28370 1054 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 KCNJ6P48051 423 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 NLRP5P59047 1200 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 ATP2C1P98194 919 aaPredicted RBP10.07□□□□□ -0.8
CSMD2-209ENST00000489419 FANCCQ00597 558 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 TTC38Q5R3I4 469 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 EP400NLQ6ZTU2 488 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 C17orf53Q8N3J3 647 aaPredicted RBP10.07□□□□□ -0.8
CSMD2-209ENST00000489419 SMARCE1Q969G3 411 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 ZBTB9Q96C00 473 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
CSMD2-209ENST00000489419 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 GAKO14976 1311 aa10.07□□□□□ -0.8
CSMD2-209ENST00000489419 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms