RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TRIM22Q8IYM9 498 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 CMTR1Q8N1G2 835 aaKnown RBP24.27■■□□□ 1.48
SND1-214ENST00000489417 ZC3H15Q8WU90 426 aaKnown RBP24.27■■□□□ 1.48
SND1-214ENST00000489417 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
SND1-214ENST00000489417 ZNF341Q9BYN7 854 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 MTMR6Q9Y217 621 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 VPS37CA5D8V6 355 aaPredicted RBP24.27■■□□□ 1.48
SND1-214ENST00000489417 POTECB2RU33 542 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 ZSCAN22P10073 491 aaPredicted RBP24.27■■□□□ 1.48
SND1-214ENST00000489417 FUT2Q10981 343 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 PRAMEF18Q5VWM3 479 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 SIAH1Q8IUQ4 282 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 MAD2L2Q9UI95 211 aa24.27■■□□□ 1.48
SND1-214ENST00000489417 PALM3A6NDB9 673 aaPredicted RBP24.26■■□□□ 1.47
SND1-214ENST00000489417 PARP1P09874 1014 aaKnown RBP24.26■■□□□ 1.47
SND1-214ENST00000489417 SUPT20HL1Q3ZLR7 823 aa24.26■■□□□ 1.47
SND1-214ENST00000489417 FOXD4L5Q5VV16 416 aaPredicted RBP24.26■■□□□ 1.47
SND1-214ENST00000489417 CCDC82Q8N4S0 544 aa24.26■■□□□ 1.47
SND1-214ENST00000489417 FOXD4L4Q8WXT5 416 aaPredicted RBP24.26■■□□□ 1.47
SND1-214ENST00000489417 RNF26Q9BY78 433 aaPredicted RBP24.26■■□□□ 1.47
SND1-214ENST00000489417 USP17L5A8MUK1 530 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 STAG2Q8N3U4 1231 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 SRBD1Q8N5C6 995 aaKnown RBP24.25■■□□□ 1.47
SND1-214ENST00000489417 WASF1Q92558 559 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 LZTS2Q9BRK4 669 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 GINM1Q9NU53 330 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 CNTNAP5Q8WYK1 1306 aa24.25■■□□□ 1.47
SND1-214ENST00000489417 MYH4Q9Y623 1939 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 SSC5DA1L4H1 1573 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 ADM5C9JUS6 153 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 H3BQV1 296 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 ASNSP08243 561 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 SNHG28P0DPA3 235 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 PDHBP11177 359 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 FOSBP53539 338 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 AKAP17AQ02040 695 aaKnown RBP24.24■■□□□ 1.47
SND1-214ENST00000489417 IFFO2Q5TF58 517 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 RASGRP2Q7LDG7 609 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 PNMA8AQ86V59 439 aaPredicted RBP24.24■■□□□ 1.47
SND1-214ENST00000489417 ALG1Q9BT22 464 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 ARHGEF10LQ9HCE6 1279 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 SYNPO2Q9UMS6 1093 aa24.24■■□□□ 1.47
SND1-214ENST00000489417 PRPF3O43395 683 aaKnown RBP24.23■■□□□ 1.47
SND1-214ENST00000489417 CTNND1O60716 968 aaKnown RBP24.23■■□□□ 1.47
SND1-214ENST00000489417 DEXIO95424 95 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 ASPRV1Q53RT3 343 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 EAPPQ56P03 285 aaPredicted RBP24.23■■□□□ 1.47
SND1-214ENST00000489417 USP17L2Q6R6M4 530 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 CDC37L1Q7L3B6 337 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 KRT26Q7Z3Y9 468 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 C8orf76Q96K31 380 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 ZNF112Q9UJU3 913 aa24.23■■□□□ 1.47
SND1-214ENST00000489417 KLRF2D3W0D1 207 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 F13A1P00488 732 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 GOLGA8HP0CJ92 632 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 USP48Q86UV5 1035 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 RGS22Q8NE09 1264 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 GMCL1P1Q8NEA9 526 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 DCAF4Q8WV16 495 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 AIFM3Q96NN9 605 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 ATAD5Q96QE3 1844 aa24.21■■□□□ 1.47
SND1-214ENST00000489417 A0A1W2PRG0 241 aa24.2■■□□□ 1.46
SND1-214ENST00000489417 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
SND1-214ENST00000489417 INPP5BP32019 993 aa24.2■■□□□ 1.46
SND1-214ENST00000489417 ZNF543Q08ER8 600 aa24.2■■□□□ 1.46
SND1-214ENST00000489417 SLFN13Q68D06 897 aa24.2■■□□□ 1.46
SND1-214ENST00000489417 RBM27Q9P2N5 1060 aaKnown RBP24.2■■□□□ 1.46
SND1-214ENST00000489417 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.2■■□□□ 1.46
SND1-214ENST00000489417 V9GY48 417 aaPredicted RBP24.2■■□□□ 1.46
SND1-214ENST00000489417 POLR2AP24928 1970 aaKnown RBP24.2■■□□□ 1.46
SND1-214ENST00000489417 SMARCA1P28370 1054 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 CCDC96Q2M329 555 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 ACER1Q8TDN7 264 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 WRNIP1Q96S55 665 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 SPZ1Q9BXG8 430 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 TMX2Q9Y320 296 aa24.19■■□□□ 1.46
SND1-214ENST00000489417 FRMPD2Q68DX3 1309 aaPredicted RBP24.19■■□□□ 1.46
SND1-214ENST00000489417 F5H6K3 240 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 ECE1P42892 770 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 GUCY1B3Q02153 619 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 KLRC3Q07444 240 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 SLC35G1Q2M3R5 365 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 GPATCH4Q5T3I0 446 aaKnown RBP24.18■■□□□ 1.46
SND1-214ENST00000489417 DLK2Q6UY11 383 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 SCYL3Q8IZE3 742 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 FBXO18Q8NFZ0 1043 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 GBP4Q96PP9 640 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 SH2D4AQ9H788 454 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 DOCK1Q14185 1865 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 RAD21O60216 631 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 TRIM29Q14134 588 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 PKN1Q16512 942 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 OTUD7BQ6GQQ9 843 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 CLEC17AQ6ZS10 378 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 KLRG1Q96E93 195 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 CDCA5Q96FF9 252 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 GPCPD1Q9NPB8 672 aa24.18■■□□□ 1.46
SND1-214ENST00000489417 hCG_1642624A0A1W2PR95 340 aa24.17■■□□□ 1.46
SND1-214ENST00000489417 CYTH3O43739 400 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 262.2 ms