RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 NCOA7Q8NI08 942 aa14.67□□□□□ -0.06
COL4A5-206ENST00000489230 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
COL4A5-206ENST00000489230 R3HDMLQ9H3Y0 253 aa14.67□□□□□ -0.06
COL4A5-206ENST00000489230 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.67□□□□□ -0.06
COL4A5-206ENST00000489230 TRIM17Q9Y577 477 aa14.67□□□□□ -0.06
COL4A5-206ENST00000489230 DOCK1Q14185 1865 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 PLIN4Q96Q06 1357 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 MCCP23508 829 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 MOGSQ13724 837 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 KRT32Q14532 448 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 TAF1CQ15572 869 aaPredicted RBP14.66□□□□□ -0.06
COL4A5-206ENST00000489230 SHROOM1Q2M3G4 852 aaPredicted RBP14.66□□□□□ -0.06
COL4A5-206ENST00000489230 TSGA10IPQ3SY00 556 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 CREB3L3Q68CJ9 461 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 GPAT2Q6NUI2 795 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 TBC1D10CQ8IV04 446 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 FAM43AQ8N2R8 423 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 CEP95Q96GE4 821 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 PARK7Q99497 189 aaKnown RBP14.66□□□□□ -0.06
COL4A5-206ENST00000489230 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
COL4A5-206ENST00000489230 OTOFQ9HC10 1997 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 A0A1W2PRG0 241 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 E7EWF7 191 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 SLC27A2O14975 620 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 KDM4AO75164 1064 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 SART3Q15020 963 aaKnown RBP14.65□□□□□ -0.06
COL4A5-206ENST00000489230 GTF3C2Q8WUA4 911 aaPredicted RBP14.65□□□□□ -0.06
COL4A5-206ENST00000489230 UBAC1Q9BSL1 405 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 MTA3Q9BTC8 594 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 ZSWIM5Q9P217 1185 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
COL4A5-206ENST00000489230 ERICH2A1L162 156 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 F5H6K3 240 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 TLR2O60603 784 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
COL4A5-206ENST00000489230 TOP1P11387 765 aaKnown RBP14.64□□□□□ -0.07
COL4A5-206ENST00000489230 GCLCP48506 637 aaPredicted RBP14.64□□□□□ -0.07
COL4A5-206ENST00000489230 NOVP48745 357 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
COL4A5-206ENST00000489230 KLRC3Q07444 240 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 ARHGEF6Q15052 776 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 GMCL1P1Q8NEA9 526 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 ZSCAN10Q96SZ4 725 aaPredicted RBP14.64□□□□□ -0.07
COL4A5-206ENST00000489230 IL17RBQ9NRM6 502 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 TACC3Q9Y6A5 838 aa14.64□□□□□ -0.07
COL4A5-206ENST00000489230 B4E1Z4 1266 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 WDR46O15213 610 aaKnown RBP14.63□□□□□ -0.07
COL4A5-206ENST00000489230 COG2Q14746 738 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
COL4A5-206ENST00000489230 TREML2Q5T2D2 321 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 CATSPERGQ6ZRH7 1159 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 TMTC2Q8N394 836 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 SMCR8Q8TEV9 937 aaPredicted RBP14.63□□□□□ -0.07
COL4A5-206ENST00000489230 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 USP26Q9BXU7 913 aa14.63□□□□□ -0.07
COL4A5-206ENST00000489230 RAD21O60216 631 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 VCAM1P19320 739 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 PSMA5P28066 241 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 MCM5P33992 734 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 HSPA4P34932 840 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 CRHR2Q13324 411 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 KCNB2Q92953 911 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 ASCC2Q9H1I8 757 aaPredicted RBP14.62□□□□□ -0.07
COL4A5-206ENST00000489230 RPAP3Q9H6T3 665 aaPredicted RBP14.62□□□□□ -0.07
COL4A5-206ENST00000489230 LAMB1P07942 1786 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 NEDD4P46934 1319 aa14.62□□□□□ -0.07
COL4A5-206ENST00000489230 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
COL4A5-206ENST00000489230 HABP4Q5JVS0 413 aaKnown RBP14.61□□□□□ -0.07
COL4A5-206ENST00000489230 SLFN13Q68D06 897 aa14.61□□□□□ -0.07
COL4A5-206ENST00000489230 GMCL1Q96IK5 515 aa14.61□□□□□ -0.07
COL4A5-206ENST00000489230 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
COL4A5-206ENST00000489230 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
COL4A5-206ENST00000489230 ATAD5Q96QE3 1844 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 IFIT3O14879 490 aaKnown RBP14.6□□□□□ -0.07
COL4A5-206ENST00000489230 NMT2O60551 498 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 SLC1A4P43007 532 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 SP3Q02447 781 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 KIF22Q14807 665 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 IFIT1BQ5T764 474 aaKnown RBP14.6□□□□□ -0.07
COL4A5-206ENST00000489230 C17orf99Q6UX52 265 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 CLEC10AQ8IUN9 316 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 CD99L2Q8TCZ2 262 aa14.6□□□□□ -0.07
COL4A5-206ENST00000489230 CHURC1Q8WUH1 139 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms