RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PI4K2BQ8TCG2 481 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 SLC9A7Q96T83 725 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 ASPNQ9BXN1 380 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 ACBD3Q9H3P7 528 aa6.23□□□□□ -1.41
RFC4-213ENST00000489028 TNFRSF10CO14798 259 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 ITGB5P18084 799 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 GJA8P48165 433 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 RBM25P49756 843 aaKnown RBP6.22□□□□□ -1.41
RFC4-213ENST00000489028 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 CCDC81Q6ZN84 652 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 TMEM192Q8IY95 271 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 RASGRP4Q8TDF6 673 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 GPRASP2Q96D09 838 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 ZNF512BQ96KM6 892 aaPredicted RBP6.22□□□□□ -1.41
RFC4-213ENST00000489028 GPR62Q9BZJ7 368 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
RFC4-213ENST00000489028 EFR3BQ9Y2G0 817 aa6.22□□□□□ -1.41
RFC4-213ENST00000489028 FAM86C2PA6NEL3 165 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 PAPLNO95428 1278 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 SOX9P48436 509 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 LRRFIP1Q32MZ4 808 aaKnown RBP6.21□□□□□ -1.42
RFC4-213ENST00000489028 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
RFC4-213ENST00000489028 RUFY4Q6ZNE9 571 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 FERD3LQ96RJ6 166 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 TGIF2Q9GZN2 237 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
RFC4-213ENST00000489028 TPP2P29144 1249 aaPredicted RBP6.2□□□□□ -1.42
RFC4-213ENST00000489028 SNW1Q13573 536 aaKnown RBP6.2□□□□□ -1.42
RFC4-213ENST00000489028 TSPYL5Q86VY4 417 aaPredicted RBP6.2□□□□□ -1.42
RFC4-213ENST00000489028 LSRQ86X29 649 aaPredicted RBP6.2□□□□□ -1.42
RFC4-213ENST00000489028 RBBP8NLQ8NC74 664 aaPredicted RBP6.2□□□□□ -1.42
RFC4-213ENST00000489028 SLC6A18Q96N87 628 aa6.2□□□□□ -1.42
RFC4-213ENST00000489028 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
RFC4-213ENST00000489028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.2□□□□□ -1.42
RFC4-213ENST00000489028 KCNH3Q9ULD8 1083 aa6.2□□□□□ -1.42
RFC4-213ENST00000489028 CLEC3AO75596 197 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 IMPDH2P12268 514 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 TCF3P15923 654 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 ZYXQ15942 572 aaKnown RBP6.19□□□□□ -1.42
RFC4-213ENST00000489028 NBPF9Q3BBW0 867 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 FBXW10Q5XX13 1052 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 TMC3Q7Z5M5 1100 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 CREG2Q8IUH2 290 aa6.19□□□□□ -1.42
RFC4-213ENST00000489028 CCNFP41002 786 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 NASPP49321 788 aaPredicted RBP6.18□□□□□ -1.42
RFC4-213ENST00000489028 RNF4P78317 190 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 TMPRSS7Q7RTY8 843 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 TAB3Q8N5C8 712 aaPredicted RBP6.18□□□□□ -1.42
RFC4-213ENST00000489028 TRIT1Q9H3H1 467 aaKnown RBP6.18□□□□□ -1.42
RFC4-213ENST00000489028 CCSER2Q9H7U1 834 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 GPATCH2Q9NW75 528 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 CTNND2Q9UQB3 1225 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 PCDHA11Q9Y5I1 949 aa6.18□□□□□ -1.42
RFC4-213ENST00000489028 CARMIL2Q6F5E8 1435 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 DNAJC25-GNG10A0A024R161 153 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 C9IYK1 514 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 ERCC5P28715 1186 aaPredicted RBP6.17□□□□□ -1.42
RFC4-213ENST00000489028 NMIQ13287 307 aaPredicted RBP6.17□□□□□ -1.42
RFC4-213ENST00000489028 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
RFC4-213ENST00000489028 RALGPS1Q5JS13 557 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 INTS3Q68E01 1043 aaKnown RBP6.17□□□□□ -1.42
RFC4-213ENST00000489028 PPFIBP1Q86W92 1011 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 FLAD1Q8NFF5 587 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 HDAC8Q9BY41 377 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 PRDM14Q9GZV8 571 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 DUSP13Q9UII6 198 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 MINPP1Q9UNW1 487 aa6.17□□□□□ -1.42
RFC4-213ENST00000489028 GUCY2CP25092 1073 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 CHMP4BP1P59074 171 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 EGR3Q06889 387 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
RFC4-213ENST00000489028 UNC5AQ6ZN44 842 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 ATG4DQ86TL0 474 aaPredicted RBP6.16□□□□□ -1.42
RFC4-213ENST00000489028 SHDQ96IW2 340 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 SPATA32Q96LK8 384 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 ALPK1Q96QP1 1244 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 TM9SF2Q99805 663 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 SRRTQ9BXP5 876 aaKnown RBP6.16□□□□□ -1.42
RFC4-213ENST00000489028 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 SUCOQ9UBS9 1254 aaKnown RBP6.16□□□□□ -1.42
RFC4-213ENST00000489028 INPP5FQ9Y2H2 1132 aa6.16□□□□□ -1.42
RFC4-213ENST00000489028 SHOXO15266 292 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 PRAMEF1O95521 474 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 JUNBP17275 347 aaPredicted RBP6.15□□□□□ -1.42
RFC4-213ENST00000489028 GIPRP48546 466 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 EIF6P56537 245 aaKnown RBP6.15□□□□□ -1.42
RFC4-213ENST00000489028 FYB2Q5VWT5 728 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 FAM169BQ8N8A8 192 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 SYTL5Q8TDW5 730 aaPredicted RBP6.15□□□□□ -1.42
RFC4-213ENST00000489028 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.42
RFC4-213ENST00000489028 ADAMTS10Q9H324 1103 aa6.15□□□□□ -1.42
RFC4-213ENST00000489028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
RFC4-213ENST00000489028 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
RFC4-213ENST00000489028 LTKP29376 864 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 PMS1P54277 932 aaKnown RBP6.14□□□□□ -1.43
RFC4-213ENST00000489028 ERVFC1P60507 584 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 TEKQ02763 1124 aa6.14□□□□□ -1.43
RFC4-213ENST00000489028 CLEC16AQ2KHT3 1053 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms