RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 U2SURPO15042 1029 aaKnown RBP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 DNAJC6O75061 913 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 VPS37DQ86XT2 251 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 RASGRP4Q8TDF6 673 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 FBF1Q8TES7 1133 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 RNPC3Q96LT9 517 aaKnown RBP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 FRMD6Q96NE9 622 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 FANCD2OSQ96PS1 177 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 SLITRK6Q9H5Y7 841 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 LIN7BQ9HAP6 207 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 SPC25Q9HBM1 224 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 LATS2Q9NRM7 1088 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 TYW1Q9NV66 732 aaKnown RBP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 DDX56Q9NY93 547 aaKnown RBP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 A0A1W2PP55 124 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 RNGTTO60942 597 aaKnown RBP4.65□□□□□ -1.67
PRPF4-203ENST00000488937 PEX14O75381 377 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 POLR3DP05423 398 aaPredicted RBP4.65□□□□□ -1.67
PRPF4-203ENST00000488937 GDNFP39905 211 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 KIAA0319Q5VV43 1072 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 PMM1Q92871 262 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 CCDC74AQ96AQ1 378 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 TCF12Q99081 682 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.65□□□□□ -1.676e-6■■□□□ 11.7
PRPF4-203ENST00000488937 SSU72Q9NP77 194 aaKnown RBP4.65□□□□□ -1.67
PRPF4-203ENST00000488937 NPHS2Q9NP85 383 aa4.65□□□□□ -1.67
PRPF4-203ENST00000488937 PNMA6FA0A0J9YX94 578 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 GNAT3A8MTJ3 354 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 LEFTY1O75610 366 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 AMPD3Q01432 767 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 PRPF40BQ6NWY9 871 aaKnown RBP4.64□□□□□ -1.67
PRPF4-203ENST00000488937 HS2ST1Q7LGA3 356 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 TMEM151BQ8IW70 566 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 CKAP2LQ8IYA6 745 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 TOP6BLQ8N6T0 577 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 TMC1Q8TDI8 760 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 KRT82Q9NSB4 513 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 USP31Q70CQ4 1352 aa4.64□□□□□ -1.67
PRPF4-203ENST00000488937 GRIN3BO60391 1043 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 ECEL1O95672 775 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 FSHBP01225 129 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 RAC2P15153 192 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 GRIA4P48058 902 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 TBX4P57082 545 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 PAK2Q13177 524 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 GPRASP2Q96D09 838 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 TEPSINQ96N21 525 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 ZNF576Q9H609 170 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 SIRPGQ9P1W8 387 aa4.63□□□□□ -1.67
PRPF4-203ENST00000488937 S100BP04271 92 aaPredicted RBP4.62□□□□□ -1.67
PRPF4-203ENST00000488937 PDGFRBP09619 1106 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 ITPKAP23677 461 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 RASA3Q14644 834 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 TTLL4Q14679 1199 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 KIF4BQ2VIQ3 1234 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 HHIPL2Q6UWX4 724 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 ERMP1Q7Z2K6 904 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.62□□□□□ -1.67
PRPF4-203ENST00000488937 SPACA3Q8IXA5 215 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 ABCB6Q9NP58 842 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 DISC1Q9NRI5 854 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 SEMA3GQ9NS98 782 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 C19orf73Q9NVV2 129 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 GABBR1Q9UBS5 961 aa4.62□□□□□ -1.67
PRPF4-203ENST00000488937 KLF4O43474 513 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 LIG1P18858 919 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 PLP2Q04941 152 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 GRM2Q14416 872 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 SPRED3Q2MJR0 410 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 ZNF385BQ569K4 471 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 RPS26P11Q5JNZ5 115 aaPredicted RBP4.61□□□□□ -1.67
PRPF4-203ENST00000488937 LRP10Q7Z4F1 713 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 KIAA0907Q7Z7F0 614 aaPredicted RBP4.61□□□□□ -1.67
PRPF4-203ENST00000488937 SEC16BQ96JE7 1060 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 UBA5Q9GZZ9 404 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 C12orf49Q9H741 205 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 ZNF408Q9H9D4 720 aa4.61□□□□□ -1.67
PRPF4-203ENST00000488937 GEMIN8Q9NWZ8 242 aaKnown RBP4.61□□□□□ -1.67
PRPF4-203ENST00000488937 HCLS1P14317 486 aaPredicted RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 ST13P50502 369 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 ARSHQ5FYA8 562 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 PI16Q6UXB8 463 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 CCAR1Q8IX12 1150 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 CCDC146Q8IYE0 955 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 EPS8L3Q8TE67 593 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 C8orf48Q96LL4 319 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 HEXIM2Q96MH2 286 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 EHD4Q9H223 541 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 CCDC86Q9H6F5 360 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 SNTG2Q9NY99 539 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 GGT7Q9UJ14 662 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 PALD1Q9ULE6 856 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 CNOT6Q9ULM6 557 aaKnown RBP4.6□□□□□ -1.67
PRPF4-203ENST00000488937 TRAK1Q9UPV9 953 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
PRPF4-203ENST00000488937 PPP1R12AO14974 1030 aaPredicted RBP4.59□□□□□ -1.67
PRPF4-203ENST00000488937 CREB3O43889 395 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 PPFIA4O75335 1185 aa4.59□□□□□ -1.67
PRPF4-203ENST00000488937 TGM1P22735 817 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms