RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 GRM4Q14833 912 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
COL21A1-211ENST00000488912 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 KIF5BP33176 963 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 SEPT2Q15019 361 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 OTUD7BQ6GQQ9 843 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
COL21A1-211ENST00000488912 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 SOCS7O14512 581 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 TBC1D12O60347 775 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 GH2P01242 217 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 TMEM179Q6ZVK1 233 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 RNF26Q9BY78 433 aaPredicted RBP12.68□□□□□ -0.38
COL21A1-211ENST00000488912 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
COL21A1-211ENST00000488912 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
COL21A1-211ENST00000488912 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 hCG_1642624A0A1W2PR95 340 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 DEXIO95424 95 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 GOLGA8HP0CJ92 632 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
COL21A1-211ENST00000488912 ICA1Q05084 483 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 RESTQ13127 1097 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
COL21A1-211ENST00000488912 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
COL21A1-211ENST00000488912 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 PDHBP11177 359 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 FAM173BQ6P4H8 233 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 ATP6V1DQ9Y5K8 247 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
COL21A1-211ENST00000488912 PKN1Q16512 942 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 WASF1Q92558 559 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
COL21A1-211ENST00000488912 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
COL21A1-211ENST00000488912 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
COL21A1-211ENST00000488912 NBPF12Q5TAG4 269 aaPredicted RBP12.65□□□□□ -0.38
COL21A1-211ENST00000488912 KRT40Q6A162 431 aa12.65□□□□□ -0.38
COL21A1-211ENST00000488912 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
COL21A1-211ENST00000488912 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
COL21A1-211ENST00000488912 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.38
COL21A1-211ENST00000488912 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
COL21A1-211ENST00000488912 KLRF2D3W0D1 207 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 CYTH3O43739 400 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 SNHG28P0DPA3 235 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 GNAQP50148 359 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 MKL1Q969V6 931 aa12.65□□□□□ -0.39
COL21A1-211ENST00000488912 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.39
COL21A1-211ENST00000488912 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.39
COL21A1-211ENST00000488912 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 CAP2P40123 477 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
COL21A1-211ENST00000488912 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 SCN4AP35499 1836 aa12.64□□□□□ -0.39
COL21A1-211ENST00000488912 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
COL21A1-211ENST00000488912 TRIM29Q14134 588 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 RAD21O60216 631 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
COL21A1-211ENST00000488912 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 SPZ1Q9BXG8 430 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 VPS54Q9P1Q0 977 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 PITPNM2Q9BZ72 1349 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
COL21A1-211ENST00000488912 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms