RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 A0A1W2PRG0 241 aa23.07■■□□□ 1.28
GGPS1-206ENST00000488594 ADORA2AP29274 412 aa23.07■■□□□ 1.28
GGPS1-206ENST00000488594 TMEM179Q6ZVK1 233 aa23.07■■□□□ 1.28
GGPS1-206ENST00000488594 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.07■■□□□ 1.28
GGPS1-206ENST00000488594 SPATC1LQ9H0A9 340 aa23.07■■□□□ 1.28
GGPS1-206ENST00000488594 SWAP70Q9UH65 585 aa23.07■■□□□ 1.28
GGPS1-206ENST00000488594 ATN1P54259 1190 aaPredicted RBP23.06■■□□□ 1.28
GGPS1-206ENST00000488594 TRPV1Q8NER1 839 aa23.06■■□□□ 1.28
GGPS1-206ENST00000488594 RHPN1Q8TCX5 695 aa23.06■■□□□ 1.28
GGPS1-206ENST00000488594 FRMPD3Q5JV73 1810 aa23.06■■□□□ 1.28
GGPS1-206ENST00000488594 ERCC3P19447 782 aa23.05■■□□□ 1.28
GGPS1-206ENST00000488594 ABRAQ8N0Z2 381 aa23.05■■□□□ 1.28
GGPS1-206ENST00000488594 CLASRPQ8N2M8 674 aaKnown RBP23.05■■□□□ 1.28
GGPS1-206ENST00000488594 MROH8Q9H579 483 aa23.05■■□□□ 1.28
GGPS1-206ENST00000488594 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
GGPS1-206ENST00000488594 DCP1AQ9NPI6 582 aaPredicted RBP23.05■■□□□ 1.28
GGPS1-206ENST00000488594 ZNF532Q9HCE3 1301 aa23.05■■□□□ 1.28
GGPS1-206ENST00000488594 ZNF236Q9UL36 1845 aa23.04■■□□□ 1.28
GGPS1-206ENST00000488594 KBTBD13C9JR72 458 aa23.04■■□□□ 1.28
GGPS1-206ENST00000488594 POTEB2H3BUK9 544 aa23.04■■□□□ 1.28
GGPS1-206ENST00000488594 RTP1P59025 263 aa23.04■■□□□ 1.28
GGPS1-206ENST00000488594 SH2D4AQ9H788 454 aa23.04■■□□□ 1.28
GGPS1-206ENST00000488594 SEPT4O43236 478 aa23.03■■□□□ 1.28
GGPS1-206ENST00000488594 SDR42E1Q8WUS8 393 aa23.03■■□□□ 1.28
GGPS1-206ENST00000488594 KIF1BPQ96EK5 621 aa23.03■■□□□ 1.28
GGPS1-206ENST00000488594 ARHGEF10LQ9HCE6 1279 aa23.03■■□□□ 1.28
GGPS1-206ENST00000488594 NAV1Q8NEY1 1877 aa23.03■■□□□ 1.28
GGPS1-206ENST00000488594 TCRBV5S4A2TA0A5A2 114 aa23.02■■□□□ 1.28
GGPS1-206ENST00000488594 GOLIM4O00461 696 aa23.02■■□□□ 1.28
GGPS1-206ENST00000488594 DSG3P32926 999 aa23.02■■□□□ 1.28
GGPS1-206ENST00000488594 GJC2Q5T442 439 aaPredicted RBP23.02■■□□□ 1.28
GGPS1-206ENST00000488594 LCORLQ8N3X6 602 aa23.02■■□□□ 1.28
GGPS1-206ENST00000488594 TMX2Q9Y320 296 aa23.02■■□□□ 1.28
GGPS1-206ENST00000488594 FLOT1O75955 427 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 IFIT2P09913 472 aaKnown RBP23.01■■□□□ 1.27
GGPS1-206ENST00000488594 HNRNPUQ00839 825 aaKnown RBP eCLIP23.01■■□□□ 1.27
GGPS1-206ENST00000488594 EVX2Q03828 476 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 SLC39A5Q6ZMH5 540 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 CCDC17Q96LX7 622 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 DNAJC2Q99543 621 aaKnown RBP23.01■■□□□ 1.27
GGPS1-206ENST00000488594 ATP8A2Q9NTI2 1148 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 A0A0C4DFX4 3053 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 COBLO75128 1261 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 ICA1Q05084 483 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 PLS1Q14651 629 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 NCAPG2Q86XI2 1143 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 SLC44A5Q8NCS7 719 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 VCPKMTQ9H867 229 aa23.01■■□□□ 1.27
GGPS1-206ENST00000488594 CYP2D6P10635 497 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 FCER1AP12319 257 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 SNX17Q15036 470 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 KIAA1755Q5JYT7 1200 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 AMOTL1Q8IY63 956 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 NRBP1Q9UHY1 535 aa23■■□□□ 1.27
GGPS1-206ENST00000488594 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 WDR46O15213 610 aaKnown RBP22.99■■□□□ 1.27
GGPS1-206ENST00000488594 HMMRO75330 724 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 SLC25A27O95847 323 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 MS4A1P11836 297 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 C1orf53Q5VUE5 145 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 SIAH1Q8IUQ4 282 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 RPAP2Q8IXW5 612 aaPredicted RBP22.99■■□□□ 1.27
GGPS1-206ENST00000488594 SPICE1Q8N0Z3 855 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 PANK1Q8TE04 598 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 ATG4CQ96DT6 458 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 GUCD1Q96NT3 240 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 ARMT1Q9H993 441 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 CUL9Q8IWT3 2517 aa22.99■■□□□ 1.27
GGPS1-206ENST00000488594 AKR1B1P15121 316 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 ZNF697Q5TEC3 545 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 DYNLL2Q96FJ2 89 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 DDRGK1Q96HY6 314 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 MAML3Q96JK9 1138 aa22.98■■□□□ 1.27
GGPS1-206ENST00000488594 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.98■■□□□ 1.27
GGPS1-206ENST00000488594 MYCNP04198 464 aaPredicted RBP22.97■■□□□ 1.27
GGPS1-206ENST00000488594 ADD2P35612 726 aa22.97■■□□□ 1.27
GGPS1-206ENST00000488594 PRDM5Q9NQX1 630 aaPredicted RBP22.97■■□□□ 1.27
GGPS1-206ENST00000488594 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
GGPS1-206ENST00000488594 APBB1O00213 710 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 RAB11FIP3O75154 756 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 MBD4O95243 580 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 LRRC41Q15345 812 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 TRIM60Q495X7 471 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 C12orf60Q5U649 245 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.96■■□□□ 1.27
GGPS1-206ENST00000488594 ADAMTS5Q9UNA0 930 aa22.96■■□□□ 1.27
GGPS1-206ENST00000488594 RLFQ13129 1914 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 PRKAB2O43741 272 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 ADCYAP1R1P41586 468 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 CDK8P49336 464 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 TMEM132BQ14DG7 1078 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 PRAMEF19Q5SWL8 479 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 CLEC10AQ8IUN9 316 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 KANSL2Q9H9L4 492 aa22.95■■□□□ 1.26
GGPS1-206ENST00000488594 RARBP10826 455 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 COPB2P35606 906 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 SHHQ15465 462 aa22.94■■□□□ 1.26
GGPS1-206ENST00000488594 FAM47AQ5JRC9 791 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms