RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FGRP09769 529 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.44
CXCL12-207ENST00000488591 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 CASC1Q6TDU7 716 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 KIAA1211Q6ZU35 1233 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 ANKRD13CQ8N6S4 541 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 RPAP3Q9H6T3 665 aaPredicted RBP17.83■□□□□ 0.44
CXCL12-207ENST00000488591 VCPKMTQ9H867 229 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 INCENPQ9NQS7 918 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 PLIN4Q96Q06 1357 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 IGKV6D-41A0A0C4DH26 115 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 SGSM2O43147 1006 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 TTLL1O95922 423 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 HERVK_113P62684 666 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 OTOP1Q7RTM1 612 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 CEP95Q96GE4 821 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 TANGO6Q9C0B7 1094 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 MTMR4Q9NYA4 1195 aa17.82■□□□□ 0.44
CXCL12-207ENST00000488591 GREB1LQ9C091 1923 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-207ENST00000488591 WDR46O15213 610 aaKnown RBP17.81■□□□□ 0.44
CXCL12-207ENST00000488591 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-207ENST00000488591 HOXD10P28358 340 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 PSMC4P43686 418 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 NT5C2P49902 561 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 FCGRTP55899 365 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 FAM110CQ1W6H9 321 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-207ENST00000488591 SPICE1Q8N0Z3 855 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 IL25Q9H293 177 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 HOXC10Q9NYD6 342 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 SYNPO2Q9UMS6 1093 aa17.81■□□□□ 0.44
CXCL12-207ENST00000488591 COG2Q14746 738 aa17.8■□□□□ 0.44
CXCL12-207ENST00000488591 GPRC5AQ8NFJ5 357 aa17.8■□□□□ 0.44
CXCL12-207ENST00000488591 ESR2Q92731 530 aa17.8■□□□□ 0.44
CXCL12-207ENST00000488591 MKL1Q969V6 931 aa17.8■□□□□ 0.44
CXCL12-207ENST00000488591 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
CXCL12-207ENST00000488591 PRMT2P55345 433 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 ARHGAP39Q9C0H5 1083 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 MORF4L1Q9UBU8 362 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 STX8Q9UNK0 236 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 TACC3Q9Y6A5 838 aa17.79■□□□□ 0.44
CXCL12-207ENST00000488591 F5H6K3 240 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 CDC45O75419 566 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
CXCL12-207ENST00000488591 PTH1RQ03431 593 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 KLRC3Q07444 240 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 CCAR1Q8IX12 1150 aaKnown RBP17.78■□□□□ 0.44
CXCL12-207ENST00000488591 ABHD8Q96I13 439 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 CNNM2Q9H8M5 875 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 PTPN22Q9Y2R2 807 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
CXCL12-207ENST00000488591 LAMA4Q16363 1823 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 TNPO2O14787 897 aaKnown RBP17.77■□□□□ 0.44
CXCL12-207ENST00000488591 FLOT1O75955 427 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 LBX2Q6XYB7 198 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 PAGR1Q9BTK6 254 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 KRT23Q9C075 422 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 TCP11L1Q9NUJ3 509 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 RBPJLQ9UBG7 517 aa17.77■□□□□ 0.44
CXCL12-207ENST00000488591 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 NMT2O60551 498 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 NDUFB10O96000 172 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 ERVK-24P63145 666 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 CCNA1P78396 465 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
CXCL12-207ENST00000488591 TRDNQ13061 729 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 CCDC178Q5BJE1 867 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 FAM83BQ5T0W9 1011 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 LRRC47Q8N1G4 583 aaKnown RBP17.76■□□□□ 0.43
CXCL12-207ENST00000488591 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 COA7Q96BR5 231 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 TTC14Q96N46 770 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 TXNRD2Q9NNW7 524 aa17.76■□□□□ 0.43
CXCL12-207ENST00000488591 SPDYE16A6NNV3 312 aaPredicted RBP17.75■□□□□ 0.43
CXCL12-207ENST00000488591 CTGFP29279 349 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 DSG3P32926 999 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 CAP1Q01518 475 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 SLFN13Q68D06 897 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CXCL12-207ENST00000488591 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
CXCL12-207ENST00000488591 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 SRRDQ9UH36 339 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 MGAMO43451 1857 aa17.75■□□□□ 0.43
CXCL12-207ENST00000488591 NEDD4P46934 1319 aa17.74■□□□□ 0.43
CXCL12-207ENST00000488591 B4E1Z4 1266 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms