RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 RPAP3Q9H6T3 665 aaPredicted RBP16.95■□□□□ 0.3
COL9A2-208ENST00000488463 KANSL2Q9H9L4 492 aa16.95■□□□□ 0.3
COL9A2-208ENST00000488463 ANAPC4Q9UJX5 808 aa16.95■□□□□ 0.3
COL9A2-208ENST00000488463 GABRQQ9UN88 632 aa16.95■□□□□ 0.3
COL9A2-208ENST00000488463 MYH4Q9Y623 1939 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 FGAP02671 866 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 FGRP09769 529 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 HSPD1P10809 573 aaKnown RBP16.94■□□□□ 0.3
COL9A2-208ENST00000488463 Q3C1V9 767 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 ZMYM6O95789 1325 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 MYPNQ86TC9 1320 aa16.94■□□□□ 0.3
COL9A2-208ENST00000488463 SPDYE16A6NNV3 312 aaPredicted RBP16.93■□□□□ 0.3
COL9A2-208ENST00000488463 IL25Q9H293 177 aa16.93■□□□□ 0.3
COL9A2-208ENST00000488463 MKNK2Q9HBH9 465 aa16.93■□□□□ 0.3
COL9A2-208ENST00000488463 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
COL9A2-208ENST00000488463 INCENPQ9NQS7 918 aa16.93■□□□□ 0.3
COL9A2-208ENST00000488463 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
COL9A2-208ENST00000488463 HOXD10P28358 340 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 ERVK-9P63128 1117 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 ERVK-24P63145 666 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 SH3TC2Q8TF17 1288 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 GTF3C2Q8WUA4 911 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-208ENST00000488463 LPAR1Q92633 364 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 PORCNQ9H237 461 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 BTBD7Q9P203 1132 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 NYAP2Q9P242 653 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 RABGAP1Q9Y3P9 1069 aa16.92■□□□□ 0.3
COL9A2-208ENST00000488463 LAMA4Q16363 1823 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 TNPO2O14787 897 aaKnown RBP16.91■□□□□ 0.3
COL9A2-208ENST00000488463 FLT3LGP49771 235 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 IRF5Q13568 498 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 SLC9C1Q4G0N8 1177 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 SPICE1Q8N0Z3 855 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 GPRC5AQ8NFJ5 357 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 MKL1Q969V6 931 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 SH2D4AQ9H788 454 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
COL9A2-208ENST00000488463 WDR46O15213 610 aaKnown RBP16.9■□□□□ 0.3
COL9A2-208ENST00000488463 PDE4BQ07343 736 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 COG2Q14746 738 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 FAM47AQ5JRC9 791 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
COL9A2-208ENST00000488463 ZNF444Q8N0Y2 327 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-208ENST00000488463 NKX2-3Q8TAU0 364 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 ZNF287Q9HBT7 754 aa16.9■□□□□ 0.3
COL9A2-208ENST00000488463 COL11A1P12107 1806 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-208ENST00000488463 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 ORC4O43929 436 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 NOVP48745 357 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 USP6NLQ92738 828 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 ADAMTS5Q9UNA0 930 aa16.89■□□□□ 0.29
COL9A2-208ENST00000488463 CEP290O15078 2479 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 HIP1O00291 1037 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
COL9A2-208ENST00000488463 GRK4P32298 578 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 DSG3P32926 999 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 TFAP4Q01664 338 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 COA7Q96BR5 231 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 FBXO28Q9NVF7 368 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 HOXC10Q9NYD6 342 aa16.88■□□□□ 0.29
COL9A2-208ENST00000488463 F5H6K3 240 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 ADCY3O60266 1144 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 NDUFB10O96000 172 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 ELNP15502 786 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 KLRC3Q07444 240 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 MTFR1Q15390 333 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 PXYLP1Q8TE99 480 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 GOPCQ9HD26 462 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
COL9A2-208ENST00000488463 TTLL1O95922 423 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 CHMLP26374 656 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 MAPK4P31152 587 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
COL9A2-208ENST00000488463 MORN1Q5T089 497 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 FAM83BQ5T0W9 1011 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 GPR142Q7Z601 462 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
COL9A2-208ENST00000488463 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms