RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 CDCP2Q5VXM1 449 aa7.88□□□□□ -1.15
VPS8-224ENST00000488255 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
VPS8-224ENST00000488255 DUSP15Q9H1R2 295 aaPredicted RBP7.88□□□□□ -1.15
VPS8-224ENST00000488255 CCSER2Q9H7U1 834 aa7.88□□□□□ -1.15
VPS8-224ENST00000488255 SLC23A3Q6PIS1 610 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 THAP5Q7Z6K1 395 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 ASPNQ9BXN1 380 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
VPS8-224ENST00000488255 COL17A1Q9UMD9 1497 aaPredicted RBP7.87□□□□□ -1.15
VPS8-224ENST00000488255 CLEC3AO75596 197 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 CLEC16AQ2KHT3 1053 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 RUFY4Q6ZNE9 571 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 CBLL1Q75N03 491 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 SLC9A7Q96T83 725 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS8-224ENST00000488255 TRIT1Q9H3H1 467 aaKnown RBP7.86□□□□□ -1.15
VPS8-224ENST00000488255 INPP5FQ9Y2H2 1132 aa7.86□□□□□ -1.15
VPS8-224ENST00000488255 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
VPS8-224ENST00000488255 SLC6A18Q96N87 628 aa7.85□□□□□ -1.15
VPS8-224ENST00000488255 CRBNQ96SW2 442 aa7.85□□□□□ -1.15
VPS8-224ENST00000488255 TGIF2Q9GZN2 237 aa7.85□□□□□ -1.15
VPS8-224ENST00000488255 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
VPS8-224ENST00000488255 SLAMF8Q9P0V8 285 aa7.85□□□□□ -1.15
VPS8-224ENST00000488255 DUSP13Q9UII6 198 aa7.85□□□□□ -1.15
VPS8-224ENST00000488255 SHISA3A0PJX4 238 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 MEIS3P2A8K0S8 358 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 ESR1P03372 595 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 IMPDH2P12268 514 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 LTKP29376 864 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 NASPP49321 788 aaPredicted RBP7.84□□□□□ -1.15
VPS8-224ENST00000488255 RNF4P78317 190 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 NBPF12Q5TAG4 269 aaPredicted RBP7.84□□□□□ -1.15
VPS8-224ENST00000488255 TMEM192Q8IY95 271 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 GPR62Q9BZJ7 368 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 MKRN2Q9H000 416 aaKnown RBP7.84□□□□□ -1.15
VPS8-224ENST00000488255 FAM86C1Q9NVL1 165 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 LMCD1Q9NZU5 365 aa7.84□□□□□ -1.15
VPS8-224ENST00000488255 TNFRSF10CO14798 259 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 ACRP10323 421 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 TCF3P15923 654 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 EGR3Q06889 387 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
VPS8-224ENST00000488255 TMPRSS7Q7RTY8 843 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 TMC3Q7Z5M5 1100 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 TSPYL5Q86VY4 417 aaPredicted RBP7.83□□□□□ -1.16
VPS8-224ENST00000488255 CPLX3Q8WVH0 158 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 VWCEQ96DN2 955 aa7.83□□□□□ -1.16
VPS8-224ENST00000488255 SRFP11831 508 aa7.82□□□□□ -1.16
VPS8-224ENST00000488255 NMIQ13287 307 aaPredicted RBP7.82□□□□□ -1.16
VPS8-224ENST00000488255 TDRD10Q5VZ19 366 aaKnown RBP7.82□□□□□ -1.16
VPS8-224ENST00000488255 ALPK1Q96QP1 1244 aa7.82□□□□□ -1.16
VPS8-224ENST00000488255 FBXL21Q9UKT6 434 aa7.82□□□□□ -1.16
VPS8-224ENST00000488255 DNAJC25-GNG10A0A024R161 153 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 MEIS1O00470 390 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 BIN1O00499 593 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
VPS8-224ENST00000488255 COL9A2Q14055 689 aaPredicted RBP7.81□□□□□ -1.16
VPS8-224ENST00000488255 ZYXQ15942 572 aaKnown RBP7.81□□□□□ -1.16
VPS8-224ENST00000488255 NBPF9Q3BBW0 867 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 RALGPS1Q5JS13 557 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 LSRQ86X29 649 aaPredicted RBP7.81□□□□□ -1.16
VPS8-224ENST00000488255 RASGRP4Q8TDF6 673 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
VPS8-224ENST00000488255 CAPN10Q9HC96 672 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 MINPP1Q9UNW1 487 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 PCDHA11Q9Y5I1 949 aa7.81□□□□□ -1.16
VPS8-224ENST00000488255 TP53P04637 393 aaPredicted RBP7.8□□□□□ -1.16
VPS8-224ENST00000488255 CCNFP41002 786 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 GJA8P48165 433 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 SOX9P48436 509 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 HK2P52789 917 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 GAB4Q2WGN9 574 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 SPATA32Q96LK8 384 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 TM9SF2Q99805 663 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 PRDM14Q9GZV8 571 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 ADAMTS10Q9H324 1103 aa7.8□□□□□ -1.16
VPS8-224ENST00000488255 C9IYK1 514 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 PAX4O43316 350 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 PAPLNO95428 1278 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 PPP2R5EQ16537 467 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 INTS3Q68E01 1043 aaKnown RBP7.79□□□□□ -1.16
VPS8-224ENST00000488255 UNC5AQ6ZN44 842 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 ATG4DQ86TL0 474 aaPredicted RBP7.79□□□□□ -1.16
VPS8-224ENST00000488255 CCDC144CPQ8IYA2 1237 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 SUCOQ9UBS9 1254 aaKnown RBP7.79□□□□□ -1.16
VPS8-224ENST00000488255 CTNND2Q9UQB3 1225 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 RNF114Q9Y508 228 aa7.79□□□□□ -1.16
VPS8-224ENST00000488255 E9PSI1 815 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 PRAMEF1O95521 474 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
VPS8-224ENST00000488255 ITGB5P18084 799 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 GUCY2CP25092 1073 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 ANAPC16Q96DE5 110 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 GFOD1Q9NXC2 390 aa7.78□□□□□ -1.16
VPS8-224ENST00000488255 SSU72P8A0A1W2PR75 194 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms