RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CNGA1P29973 690 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 RING1Q06587 406 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 PDE3AQ14432 1141 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 LONRF2Q1L5Z9 754 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 KIF4BQ2VIQ3 1234 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 ZC3H12AQ5D1E8 599 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 FAM209AQ5JX71 171 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 GGT6Q6P531 493 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 C20orf204Q6ZNR8 217 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 FERMT3Q86UX7 667 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 LRRC47Q8N1G4 583 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 UBR7Q8N806 425 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 NANOS1Q8WY41 292 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 JDP2Q8WYK2 163 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 WNT8BQ93098 351 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 KISS1RQ969F8 398 aaPredicted RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 KIFC2Q96AC6 838 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 MFSD3Q96ES6 412 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 EXOC2Q96KP1 924 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 CLUHP3Q96NS8 147 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 OSGEPQ9NPF4 335 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 HOMER2Q9NSB8 354 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 TYW1Q9NV66 732 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 GMPR2Q9P2T1 348 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 FAN1Q9Y2M0 1017 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 ATP8A1Q9Y2Q0 1164 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 THRAP3Q9Y2W1 955 aaKnown RBP4.54□□□□□ -1.68
GPNMB-212ENST00000487890 CAMSAP2Q08AD1 1489 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 NCOA2Q15596 1464 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 CNTLNQ9NXG0 1405 aa4.54□□□□□ -1.68
GPNMB-212ENST00000487890 STRCQ7RTU9 1775 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 AGLP35573 1532 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 A0A1W2PQU0 124 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 PRAMEF27A3QJZ7 478 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 IQCA1LA6NCM1 817 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 DDX3YO15523 660 aaKnown RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 RFPL3O75679 317 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 MAP4K4O95819 1239 aaPredicted RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 STAT3P40763 770 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 AFF1P51825 1210 aaKnown RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 PDE4BQ07343 736 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 BRDTQ58F21 947 aaPredicted RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 PPM1JQ5JR12 505 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 YOD1Q5VVQ6 348 aaPredicted RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 FAM117BQ6P1L5 589 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 PPFIBP1Q86W92 1011 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 DDX42Q86XP3 938 aaKnown RBP eCLIP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 FMNL3Q8IVF7 1028 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 TMEM192Q8IY95 271 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 CHAC2Q8WUX2 184 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 SGSM3Q96HU1 749 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 EPN3Q9H201 632 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 JPH1Q9HDC5 661 aaPredicted RBP4.53□□□□□ -1.68
GPNMB-212ENST00000487890 ARHGEF4Q9NR80 690 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 FAM86C1Q9NVL1 165 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 SUSD2Q9UGT4 822 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 GGA1Q9UJY5 639 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 ADAM30Q9UKF2 790 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 HIF3AQ9Y2N7 669 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 A2MP01023 1474 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 MROH2AA6NES4 1674 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 VPS8Q8N3P4 1428 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 KIAA1107Q9UPP5 1409 aa4.53□□□□□ -1.68
GPNMB-212ENST00000487890 CCDC141Q6ZP82 1450 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 ALBP02768 609 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 RAG1P15918 1043 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 ALAS2P22557 587 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 NLRP12P59046 1061 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 ETF1P62495 437 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 SUZ12Q15022 739 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 SV2CQ496J9 727 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 ZC3H12BQ5HYM0 836 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 ODR4Q5SWX8 454 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 C8orf86Q6ZUL3 223 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 MCATQ8IVS2 390 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 RAVER1Q8IY67 606 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 GPR161Q8N6U8 529 aaKnown RBP4.52□□□□□ -1.69
GPNMB-212ENST00000487890 GALNT11Q8NCW6 608 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 FBXO41Q8TF61 875 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 KIF2CQ99661 725 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 DHRS4Q9BTZ2 278 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 WDR18Q9BV38 432 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 USP26Q9BXU7 913 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 WNT10AQ9GZT5 417 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 CAAP1Q9H8G2 361 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 TJP2Q9UDY2 1190 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 PCDHGC5Q9Y5F6 944 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 PLXNC1O60486 1568 aa4.52□□□□□ -1.69
GPNMB-212ENST00000487890 LRRC9Q6ZRR7 1453 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 MYO3AQ8NEV4 1616 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 CCDC163A0A0D9SF12 145 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 LOC100289279A0A1B0GTE1 492 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 GSG1L2A8MUP6 293 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 C9IYK1 514 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 RGS13O14921 159 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 PLD2O14939 933 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 KIF3BO15066 747 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 PDE8AO60658 829 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 ADAM11O75078 769 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms