RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
CDK11A-217ENST00000487462 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 TLL1O43897 1013 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 PSEN2P49810 448 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDK11A-217ENST00000487462 FLIIQ13045 1269 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
CDK11A-217ENST00000487462 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
CDK11A-217ENST00000487462 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 MICALL1Q8N3F8 863 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 WDR66Q8TBY9 1149 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 NDUFB9Q9Y6M9 179 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 SPTBN4Q9H254 2564 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 BRWD1Q9NSI6 2320 aa11.91□□□□□ -0.5
CDK11A-217ENST00000487462 ZNF236Q9UL36 1845 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 KIF16BQ96L93 1317 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 SMCHD1A6NHR9 2005 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 HOXC6P09630 235 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 MTMR2Q13614 643 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 LRRC41Q15345 812 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 C16orf59Q7L2K0 433 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
CDK11A-217ENST00000487462 NPLOC4Q8TAT6 608 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 PAGR1Q9BTK6 254 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
CDK11A-217ENST00000487462 CD320Q9NPF0 282 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
CDK11A-217ENST00000487462 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
CDK11A-217ENST00000487462 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
CDK11A-217ENST00000487462 LRRC24Q50LG9 513 aa11.89□□□□□ -0.51
CDK11A-217ENST00000487462 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
CDK11A-217ENST00000487462 NKX2-4Q9H2Z4 354 aa11.89□□□□□ -0.51
CDK11A-217ENST00000487462 YBX2Q9Y2T7 364 aaKnown RBP11.89□□□□□ -0.51
CDK11A-217ENST00000487462 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
CDK11A-217ENST00000487462 GAKO14976 1311 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 MYO15AQ9UKN7 3530 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 SLC15A5A6NIM6 579 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 CNMDO75829 334 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 PDE8BO95263 885 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 CAP2P40123 477 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 BACE1P56817 501 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 FAAP100Q0VG06 881 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 FKBP5Q13451 457 aaPredicted RBP11.88□□□□□ -0.51
CDK11A-217ENST00000487462 PICALMQ13492 652 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 GRB14Q14449 540 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 METTL24Q5JXM2 366 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 BEND3Q5T5X7 828 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 HERVK_113Q902F9 699 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 FBXL18Q96ME1 805 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDK11A-217ENST00000487462 TMEM39AQ9NV64 488 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
CDK11A-217ENST00000487462 TK2O00142 265 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 GRM8O00222 908 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 SEPT4O43236 478 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 LDHBP07195 334 aaKnown RBP11.87□□□□□ -0.51
CDK11A-217ENST00000487462 FGFR2P21802 821 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
CDK11A-217ENST00000487462 SKIV2LQ15477 1246 aaKnown RBP11.87□□□□□ -0.51
CDK11A-217ENST00000487462 RAB30Q15771 203 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 FAM47AQ5JRC9 791 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDK11A-217ENST00000487462 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
CDK11A-217ENST00000487462 TIMP1P01033 207 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 GTF3C2Q8WUA4 911 aaPredicted RBP11.86□□□□□ -0.51
CDK11A-217ENST00000487462 SLC4A5Q9BY07 1137 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
CDK11A-217ENST00000487462 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 TBX21Q9UL17 535 aa11.86□□□□□ -0.51
CDK11A-217ENST00000487462 A0A1W2PQ45 241 aaPredicted RBP11.85□□□□□ -0.51
CDK11A-217ENST00000487462 A0A1W2PQY0 241 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 F6X3S4 739 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
CDK11A-217ENST00000487462 JAG1P78504 1218 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
CDK11A-217ENST00000487462 PUM3Q15397 648 aaKnown RBP11.85□□□□□ -0.51
CDK11A-217ENST00000487462 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
CDK11A-217ENST00000487462 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 SLC28A3Q9HAS3 691 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
CDK11A-217ENST00000487462 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
CDK11A-217ENST00000487462 PPIGQ13427 754 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK11A-217ENST00000487462 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
CDK11A-217ENST00000487462 WDR78Q5VTH9 848 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms