RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SDSP20132 328 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 MAPK4P31152 587 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNF220-215ENST00000487332 RAD50Q92878 1312 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 FGRP09769 529 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 PCP11498 1178 aaKnown RBP12.22□□□□□ -0.45
RNF220-215ENST00000487332 EEF2P13639 858 aaKnown RBP12.22□□□□□ -0.45
RNF220-215ENST00000487332 GRK4P32298 578 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 SOX10P56693 466 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 CCNA1P78396 465 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 NMIQ13287 307 aaPredicted RBP12.22□□□□□ -0.45
RNF220-215ENST00000487332 ZYXQ15942 572 aaKnown RBP12.22□□□□□ -0.45
RNF220-215ENST00000487332 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 RILPL2Q969X0 211 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 FAM227BQ96M60 508 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 GOPCQ9HD26 462 aa12.22□□□□□ -0.45
RNF220-215ENST00000487332 LAMA4Q16363 1823 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 PARP14Q460N5 1801 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 CNMDO75829 334 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 HSPD1P10809 573 aaKnown RBP12.21□□□□□ -0.45
RNF220-215ENST00000487332 PDE4AP27815 886 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 NOVP48745 357 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 FLT3LGP49771 235 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 UBXN2AP68543 259 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
RNF220-215ENST00000487332 COG2Q14746 738 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 ZNF589Q86UQ0 364 aaPredicted RBP12.21□□□□□ -0.45
RNF220-215ENST00000487332 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
RNF220-215ENST00000487332 ZNF444Q8N0Y2 327 aaPredicted RBP12.21□□□□□ -0.45
RNF220-215ENST00000487332 SHCBP1Q8NEM2 672 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 MKL1Q969V6 931 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 HOXC10Q9NYD6 342 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 GABRQQ9UN88 632 aa12.21□□□□□ -0.45
RNF220-215ENST00000487332 RLFQ13129 1914 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 ORC4O43929 436 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
RNF220-215ENST00000487332 GSPT1P15170 499 aaKnown RBP12.2□□□□□ -0.46
RNF220-215ENST00000487332 DSG3P32926 999 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
RNF220-215ENST00000487332 KIAA1755Q5JYT7 1200 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 DIAPH3Q9NSV4 1193 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 MTMR4Q9NYA4 1195 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 GJD2Q9UKL4 321 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 ADAMTS5Q9UNA0 930 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 PLXNB2O15031 1838 aa12.2□□□□□ -0.46
RNF220-215ENST00000487332 ADCY3O60266 1144 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 TTLL1O95922 423 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 FGAP02671 866 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 Q3C1V9 767 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 GPR142Q7Z601 462 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 SH3TC2Q8TF17 1288 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 USP6NLQ92738 828 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 DSCC1Q9BVC3 393 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 TMEM106CQ9BVX2 250 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
RNF220-215ENST00000487332 PRDM1O75626 825 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 FLOT1O75955 427 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 HMGCRP04035 888 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 COPB2P35606 906 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 MORN1Q5T089 497 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 PLEKHH3Q7Z736 793 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 APBA2Q99767 749 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 PORCNQ9H237 461 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 TCP11L1Q9NUJ3 509 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 BTBD7Q9P203 1132 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
RNF220-215ENST00000487332 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 TSPY2A6NKD2 308 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 F5H6K3 240 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 SLC25A27O95847 323 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 NDUFB10O96000 172 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 INHAP05111 366 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 GJB1P08034 283 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 HOXC6P09630 235 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 RGS2P41220 211 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 TFAP4Q01664 338 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 KLRC3Q07444 240 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 GRB14Q14449 540 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
RNF220-215ENST00000487332 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
RNF220-215ENST00000487332 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms