RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MUC6Q6W4X9 2439 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 SMCHD1A6NHR9 2005 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 ROBO3Q96MS0 1386 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 MROH7Q68CQ1 1323 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 KIAA0355O15063 1070 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 SRGAP3O43295 1099 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 PQBP1O60828 265 aaKnown RBP9.37□□□□□ -0.91
PDPN-205ENST00000487038 MCAMP43121 646 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 PPP4CP60510 307 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 JAG1P78504 1218 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 SHROOM1Q2M3G4 852 aaPredicted RBP9.37□□□□□ -0.91
PDPN-205ENST00000487038 FAM47AQ5JRC9 791 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 CCDC129Q6ZRS4 1044 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 PPM1EQ8WY54 764 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
PDPN-205ENST00000487038 XPNPEP3Q9NQH7 507 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 TMEM39AQ9NV64 488 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 BTBD7Q9P203 1132 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
PDPN-205ENST00000487038 RAPGEFL1Q9UHV5 662 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 NRBP1Q9UHY1 535 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 PHF24Q9UPV7 400 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
PDPN-205ENST00000487038 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
PDPN-205ENST00000487038 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 IGHA2P01877 340 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 ABRAQ8N0Z2 381 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 MB21D1Q8N884 522 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 MOV10L1Q9BXT6 1211 aaKnown RBP9.36□□□□□ -0.91
PDPN-205ENST00000487038 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 SPATC1LQ9H0A9 340 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 EHD4Q9H223 541 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 MROH8Q9H579 483 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 HOXC10Q9NYD6 342 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 LRRC37A2A6NM11 1700 aa9.36□□□□□ -0.91
PDPN-205ENST00000487038 A0A1W2PQ45 241 aaPredicted RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 A0A1W2PQY0 241 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 E9PSI1 815 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 ERCC3P19447 782 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 USP5P45974 858 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 EPHB4P54760 987 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 PPIGQ13427 754 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDPN-205ENST00000487038 PLS1Q14651 629 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 COG2Q14746 738 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 RAB30Q15771 203 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 CERKLQ49MI3 558 aaPredicted RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 CCDC158Q5M9N0 1113 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 NCAPG2Q86XI2 1143 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 SLC44A5Q8NCS7 719 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 MAML3Q96JK9 1138 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 TOX2Q96NM4 488 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 API5Q9BZZ5 524 aaKnown RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 MTIF3Q9H2K0 278 aaKnown RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
PDPN-205ENST00000487038 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
PDPN-205ENST00000487038 MOXD2PA6NHM9 499 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 TIMP1P01033 207 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 GNAI3P08754 354 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 FCER1AP12319 257 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 AKR1A1P14550 325 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 ITGB8P26012 769 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDPN-205ENST00000487038 MTX1Q13505 466 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 AAK1Q2M2I8 961 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 PSRC1Q6PGN9 363 aaPredicted RBP9.34□□□□□ -0.91
PDPN-205ENST00000487038 ANKRD33Q7Z3H0 272 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 ADGRA1Q86SQ6 560 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 TMEM199Q8N511 208 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDPN-205ENST00000487038 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 PRDM12Q9H4Q4 367 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
PDPN-205ENST00000487038 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 APBB1O00213 710 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 ANP32CO43423 234 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 COBLO75128 1261 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 SLC25A27O95847 323 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 IGFBP4P22692 258 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 FAAP100Q0VG06 881 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 PRAMEF19Q5SWL8 479 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 FAM9BQ8IZU0 186 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 ACER1Q8TDN7 264 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 MEIS3Q99687 375 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
PDPN-205ENST00000487038 SH2D4AQ9H788 454 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
PDPN-205ENST00000487038 SYNGAP1Q96PV0 1343 aa9.32□□□□□ -0.92
PDPN-205ENST00000487038 MPHOSPH10O00566 681 aaKnown RBP9.32□□□□□ -0.92
PDPN-205ENST00000487038 FLOT1O75955 427 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms