RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MKL1Q969V6 931 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 ZBED3Q96IU2 234 aaPredicted RBP13.41□□□□□ -0.26
PRKCB-207ENST00000486868 NYAP2Q9P242 653 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
PRKCB-207ENST00000486868 CEP131Q9UPN4 1083 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
PRKCB-207ENST00000486868 FAM237AA0A1B0GTK4 181 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 SYCE3A1L190 88 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 BTBD18B2RXH4 712 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRKCB-207ENST00000486868 PTGER2P43116 358 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 R3HDM1Q15032 1099 aaKnown RBP13.4□□□□□ -0.26
PRKCB-207ENST00000486868 PTPAQ15257 358 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
PRKCB-207ENST00000486868 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 FAM83AQ86UY5 434 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 DAGLBQ8NCG7 672 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 FAM151AQ8WW52 585 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
PRKCB-207ENST00000486868 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 PSME4Q14997 1843 aa13.4□□□□□ -0.26
PRKCB-207ENST00000486868 TCHHQ07283 1943 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 TBC1D12O60347 775 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 AKR1B1P15121 316 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 LIG1P18858 919 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CMA1P23946 247 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 ME1P48163 572 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CXCL9Q07325 125 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CCDC73Q6ZRK6 1079 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
PRKCB-207ENST00000486868 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
PRKCB-207ENST00000486868 TNFRSF25Q93038 417 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 TSPY26PQ9H489 355 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 RIOX1Q9H6W3 641 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 MYH1P12882 1939 aa13.39□□□□□ -0.27
PRKCB-207ENST00000486868 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 NFKBIEO00221 500 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 CUTAO60888 179 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 RAD17O75943 681 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 CAVIN2O95810 425 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 ZNF280AP59817 542 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 NPY5RQ15761 445 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 CERKLQ49MI3 558 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 DPF2Q92785 391 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 FUCA2Q9BTY2 467 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 DACT1Q9NYF0 836 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
PRKCB-207ENST00000486868 KCNJ14Q9UNX9 436 aa13.38□□□□□ -0.27
PRKCB-207ENST00000486868 ESYT2A0FGR8 921 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 PDHBP11177 359 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 TIGD1Q96MW7 591 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRKCB-207ENST00000486868 BARHL2Q9NY43 387 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
PRKCB-207ENST00000486868 FZD9O00144 591 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 CYTH3O43739 400 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 MYO1BO43795 1136 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 NR1I2O75469 434 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 PTPREP23469 700 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 TOB1P50616 345 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-207ENST00000486868 NLRP5P59047 1200 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
PRKCB-207ENST00000486868 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 SNW1Q13573 536 aaKnown RBP13.36□□□□□ -0.27
PRKCB-207ENST00000486868 TEX2Q8IWB9 1127 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms