RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MBNL3Q9NUK0 354 aaKnown RBP8.81□□□□□ -1
LTN1-206ENST00000486427 ZSWIM5Q9P217 1185 aa8.81□□□□□ -1
LTN1-206ENST00000486427 EFR3BQ9Y2G0 817 aa8.81□□□□□ -1
LTN1-206ENST00000486427 TNFRSF10CO14798 259 aa8.8□□□□□ -1
LTN1-206ENST00000486427 IRAK1P51617 712 aa8.8□□□□□ -1
LTN1-206ENST00000486427 ZNF792Q3KQV3 632 aa8.8□□□□□ -1
LTN1-206ENST00000486427 FBXW10Q5XX13 1052 aa8.8□□□□□ -1
LTN1-206ENST00000486427 CCDC81Q6ZN84 652 aa8.8□□□□□ -1
LTN1-206ENST00000486427 THAP5Q7Z6K1 395 aa8.8□□□□□ -1
LTN1-206ENST00000486427 SLC9A7Q96T83 725 aa8.8□□□□□ -1
LTN1-206ENST00000486427 ASPNQ9BXN1 380 aa8.8□□□□□ -1
LTN1-206ENST00000486427 RNASE1P07998 156 aaKnown RBP8.79□□□□□ -1
LTN1-206ENST00000486427 ACRP10323 421 aa8.79□□□□□ -1
LTN1-206ENST00000486427 IMPDH2P12268 514 aa8.79□□□□□ -1
LTN1-206ENST00000486427 SOX9P48436 509 aa8.79□□□□□ -1
LTN1-206ENST00000486427 ZP2Q05996 745 aa8.79□□□□□ -1
LTN1-206ENST00000486427 TMEM192Q8IY95 271 aa8.79□□□□□ -1
LTN1-206ENST00000486427 CCSER2Q9H7U1 834 aa8.79□□□□□ -1
LTN1-206ENST00000486427 SRFP11831 508 aa8.78□□□□□ -1
LTN1-206ENST00000486427 ERCC5P28715 1186 aaPredicted RBP8.78□□□□□ -1
LTN1-206ENST00000486427 RUFY4Q6ZNE9 571 aa8.78□□□□□ -1
LTN1-206ENST00000486427 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
LTN1-206ENST00000486427 ZNF512BQ96KM6 892 aaPredicted RBP8.78□□□□□ -1
LTN1-206ENST00000486427 GPR62Q9BZJ7 368 aa8.78□□□□□ -1
LTN1-206ENST00000486427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.78□□□□□ -1
LTN1-206ENST00000486427 CARS2Q9HA77 564 aaKnown RBP8.78□□□□□ -1
LTN1-206ENST00000486427 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
LTN1-206ENST00000486427 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
LTN1-206ENST00000486427 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
LTN1-206ENST00000486427 COL9A2Q14055 689 aaPredicted RBP8.77□□□□□ -1.01
LTN1-206ENST00000486427 NBPF12Q5TAG4 269 aaPredicted RBP8.77□□□□□ -1.01
LTN1-206ENST00000486427 LSRQ86X29 649 aaPredicted RBP8.77□□□□□ -1.01
LTN1-206ENST00000486427 RBBP8NLQ8NC74 664 aaPredicted RBP8.77□□□□□ -1.01
LTN1-206ENST00000486427 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
LTN1-206ENST00000486427 INPP5FQ9Y2H2 1132 aa8.77□□□□□ -1.01
LTN1-206ENST00000486427 ESR1P03372 595 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 TAL1P17542 331 aaPredicted RBP8.76□□□□□ -1.01
LTN1-206ENST00000486427 CCNFP41002 786 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 NASPP49321 788 aaPredicted RBP8.76□□□□□ -1.01
LTN1-206ENST00000486427 CHMP4BP1P59074 171 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 GAB4Q2WGN9 574 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 SLC23A3Q6PIS1 610 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 SLC6A18Q96N87 628 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 LMCD1Q9NZU5 365 aa8.76□□□□□ -1.01
LTN1-206ENST00000486427 CLEC3AO75596 197 aa8.75□□□□□ -1.01
LTN1-206ENST00000486427 TPP2P29144 1249 aaPredicted RBP8.75□□□□□ -1.01
LTN1-206ENST00000486427 RNF4P78317 190 aa8.75□□□□□ -1.01
LTN1-206ENST00000486427 ZYXQ15942 572 aaKnown RBP8.75□□□□□ -1.01
LTN1-206ENST00000486427 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
LTN1-206ENST00000486427 LRRN4CLQ8ND94 238 aa8.75□□□□□ -1.01
LTN1-206ENST00000486427 TM9SF2Q99805 663 aa8.75□□□□□ -1.01
LTN1-206ENST00000486427 RC3H2Q9HBD1 1191 aaKnown RBP8.75□□□□□ -1.01
LTN1-206ENST00000486427 SNW1Q13573 536 aaKnown RBP8.74□□□□□ -1.01
LTN1-206ENST00000486427 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
LTN1-206ENST00000486427 TSPYL5Q86VY4 417 aaPredicted RBP8.74□□□□□ -1.01
LTN1-206ENST00000486427 TAB3Q8N5C8 712 aaPredicted RBP8.74□□□□□ -1.01
LTN1-206ENST00000486427 TRIT1Q9H3H1 467 aaKnown RBP8.74□□□□□ -1.01
LTN1-206ENST00000486427 GPATCH2Q9NW75 528 aa8.74□□□□□ -1.01
LTN1-206ENST00000486427 TMPRSS7Q7RTY8 843 aa8.73□□□□□ -1.01
LTN1-206ENST00000486427 TMC3Q7Z5M5 1100 aa8.73□□□□□ -1.01
LTN1-206ENST00000486427 CREG2Q8IUH2 290 aa8.73□□□□□ -1.01
LTN1-206ENST00000486427 KRTAP9-9Q9BYP9 154 aa8.73□□□□□ -1.01
LTN1-206ENST00000486427 KRTAP9-4Q9BYQ2 154 aa8.73□□□□□ -1.01
LTN1-206ENST00000486427 E9PSI1 815 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 GUCY2CP25092 1073 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 GIPRP48546 466 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
LTN1-206ENST00000486427 SHDQ96IW2 340 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 SEC16BQ96JE7 1060 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 SRRTQ9BXP5 876 aaKnown RBP8.72□□□□□ -1.01
LTN1-206ENST00000486427 DUSP13Q9UII6 198 aa8.72□□□□□ -1.01
LTN1-206ENST00000486427 C9IYK1 514 aa8.71□□□□□ -1.02
LTN1-206ENST00000486427 ITGB5P18084 799 aa8.71□□□□□ -1.02
LTN1-206ENST00000486427 NMIQ13287 307 aaPredicted RBP8.71□□□□□ -1.02
LTN1-206ENST00000486427 UNC5AQ6ZN44 842 aa8.71□□□□□ -1.02
LTN1-206ENST00000486427 CRBNQ96SW2 442 aa8.71□□□□□ -1.02
LTN1-206ENST00000486427 PRDM14Q9GZV8 571 aa8.71□□□□□ -1.02
LTN1-206ENST00000486427 SUCOQ9UBS9 1254 aaKnown RBP8.71□□□□□ -1.02
LTN1-206ENST00000486427 PAPLNO95428 1278 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 ATF4P18848 351 aaPredicted RBP8.7□□□□□ -1.02
LTN1-206ENST00000486427 TDRD10Q5VZ19 366 aaKnown RBP8.7□□□□□ -1.02
LTN1-206ENST00000486427 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 HDAC8Q9BY41 377 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 MKRN2Q9H000 416 aaKnown RBP8.7□□□□□ -1.02
LTN1-206ENST00000486427 CAPN10Q9HC96 672 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 C19orf73Q9NVV2 129 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 PCDHA11Q9Y5I1 949 aa8.7□□□□□ -1.02
LTN1-206ENST00000486427 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 TINF2Q9BSI4 451 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 SLAMF8Q9P0V8 285 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 MINPP1Q9UNW1 487 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 CTNND2Q9UQB3 1225 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
LTN1-206ENST00000486427 DNAJC25-GNG10A0A024R161 153 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 PMS1P54277 932 aaKnown RBP8.68□□□□□ -1.02
LTN1-206ENST00000486427 EGR3Q06889 387 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 RALGPS1Q5JS13 557 aa8.68□□□□□ -1.02
LTN1-206ENST00000486427 TTC6Q86TZ1 520 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms