RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-211ENST00000485967 TTLL1O95922 423 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 MCCP23508 829 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAP-211ENST00000485967 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 SIAH1Q8IUQ4 282 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 PROCA1Q8NCQ7 364 aaPredicted RBP16.3■□□□□ 0.2
SCAP-211ENST00000485967 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
SCAP-211ENST00000485967 IGKV6D-41A0A0C4DH26 115 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
SCAP-211ENST00000485967 NMT2O60551 498 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 GOPCQ9HD26 462 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
SCAP-211ENST00000485967 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
SCAP-211ENST00000485967 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 PDHXO00330 501 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 OSBPP22059 807 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 KRT32Q14532 448 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 TAF1CQ15572 869 aaPredicted RBP16.28■□□□□ 0.2
SCAP-211ENST00000485967 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
SCAP-211ENST00000485967 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 EMILIN3Q9NT22 766 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 TAF6LQ9Y6J9 622 aa16.28■□□□□ 0.2
SCAP-211ENST00000485967 PHIPQ8WWQ0 1821 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 ERICH2A1L162 156 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 HSPA4P34932 840 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 CRHR2Q13324 411 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 MOGSQ13724 837 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 OTOP1Q7RTM1 612 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 MKL1Q969V6 931 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 TTC14Q96N46 770 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 ZSCAN10Q96SZ4 725 aaPredicted RBP16.27■□□□□ 0.2
SCAP-211ENST00000485967 VCPKMTQ9H867 229 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 ZFYVE28Q9HCC9 887 aa16.27■□□□□ 0.2
SCAP-211ENST00000485967 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
SCAP-211ENST00000485967 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
SCAP-211ENST00000485967 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
SCAP-211ENST00000485967 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 CYB5R4Q7L1T6 521 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
SCAP-211ENST00000485967 LPAR1Q92633 364 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
SCAP-211ENST00000485967 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
SCAP-211ENST00000485967 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 F5H6K3 240 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
SCAP-211ENST00000485967 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
SCAP-211ENST00000485967 VCAM1P19320 739 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 MCM5P33992 734 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 KLRC3Q07444 240 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 NEK1Q96PY6 1258 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
SCAP-211ENST00000485967 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
SCAP-211ENST00000485967 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
SCAP-211ENST00000485967 TNKSO95271 1327 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
SCAP-211ENST00000485967 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
SCAP-211ENST00000485967 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
SCAP-211ENST00000485967 WDR46O15213 610 aaKnown RBP16.23■□□□□ 0.19
SCAP-211ENST00000485967 PRC1O43663 620 aa16.23■□□□□ 0.19
SCAP-211ENST00000485967 SEC24BO95487 1268 aa16.23■□□□□ 0.19
SCAP-211ENST00000485967 NDUFB10O96000 172 aa16.23■□□□□ 0.19
SCAP-211ENST00000485967 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
SCAP-211ENST00000485967 CYP2C8P10632 490 aa16.23■□□□□ 0.19
SCAP-211ENST00000485967 PSMA5P28066 241 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms