RNA–Protein interactions for RNA: ENST00000485180.1

USP9X-207, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-207ENST00000485180 ZSWIM9Q86XI8 627 aa12.96□□□□□ -0.33
USP9X-207ENST00000485180 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
USP9X-207ENST00000485180 CCDC120Q96HB5 630 aa12.96□□□□□ -0.33
USP9X-207ENST00000485180 RECKO95980 971 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 GDNFP39905 211 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 AFMP43652 599 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 ZNF165P49910 485 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 POU5F2Q8N7G0 328 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 SLAMF8Q9P0V8 285 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
USP9X-207ENST00000485180 MCM4P33991 863 aa12.94□□□□□ -0.34
USP9X-207ENST00000485180 ZNF394Q53GI3 561 aa12.94□□□□□ -0.34
USP9X-207ENST00000485180 RNF34Q969K3 372 aa12.93□□□□□ -0.34
USP9X-207ENST00000485180 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
USP9X-207ENST00000485180 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
USP9X-207ENST00000485180 KCNMB1Q16558 191 aa12.92□□□□□ -0.34
USP9X-207ENST00000485180 FYB2Q5VWT5 728 aa12.92□□□□□ -0.34
USP9X-207ENST00000485180 NLRC3Q7RTR2 1065 aa12.92□□□□□ -0.34
USP9X-207ENST00000485180 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP9X-207ENST00000485180 PCDHGB7Q9Y5F8 929 aa12.92□□□□□ -0.34
USP9X-207ENST00000485180 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
USP9X-207ENST00000485180 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
USP9X-207ENST00000485180 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
USP9X-207ENST00000485180 RNF4P78317 190 aa12.91□□□□□ -0.34
USP9X-207ENST00000485180 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
USP9X-207ENST00000485180 TMEM59LQ9UK28 342 aa12.91□□□□□ -0.34
USP9X-207ENST00000485180 SHISA3A0PJX4 238 aa12.9□□□□□ -0.34
USP9X-207ENST00000485180 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
USP9X-207ENST00000485180 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
USP9X-207ENST00000485180 EGR3Q06889 387 aa12.89□□□□□ -0.35
USP9X-207ENST00000485180 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
USP9X-207ENST00000485180 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
USP9X-207ENST00000485180 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
USP9X-207ENST00000485180 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
USP9X-207ENST00000485180 NME1P15531 152 aaKnown RBP12.88□□□□□ -0.35
USP9X-207ENST00000485180 LTKP29376 864 aa12.88□□□□□ -0.35
USP9X-207ENST00000485180 CCNFP41002 786 aa12.88□□□□□ -0.35
USP9X-207ENST00000485180 LCE3BQ5TA77 95 aa12.88□□□□□ -0.35
USP9X-207ENST00000485180 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
USP9X-207ENST00000485180 GLI1P08151 1106 aa12.87□□□□□ -0.35
USP9X-207ENST00000485180 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
USP9X-207ENST00000485180 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
USP9X-207ENST00000485180 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
USP9X-207ENST00000485180 ADAMTS10Q9H324 1103 aa12.87□□□□□ -0.35
USP9X-207ENST00000485180 PCDHA11Q9Y5I1 949 aa12.87□□□□□ -0.35
USP9X-207ENST00000485180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.86□□□□□ -0.35
USP9X-207ENST00000485180 YBX3P16989 372 aaKnown RBP eCLIP12.86□□□□□ -0.358e-7■■□□□ 12.2
USP9X-207ENST00000485180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP9X-207ENST00000485180 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
USP9X-207ENST00000485180 ZNRF3Q9ULT6 936 aa12.86□□□□□ -0.35
USP9X-207ENST00000485180 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
USP9X-207ENST00000485180 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
USP9X-207ENST00000485180 ENOX1Q8TC92 643 aaKnown RBP12.85□□□□□ -0.35
USP9X-207ENST00000485180 HK2P52789 917 aa12.84□□□□□ -0.35
USP9X-207ENST00000485180 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
USP9X-207ENST00000485180 MRRFQ96E11 262 aaKnown RBP12.84□□□□□ -0.35
USP9X-207ENST00000485180 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
USP9X-207ENST00000485180 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
USP9X-207ENST00000485180 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
USP9X-207ENST00000485180 CLEC3AO75596 197 aa12.83□□□□□ -0.36
USP9X-207ENST00000485180 HPXP02790 462 aa12.83□□□□□ -0.36
USP9X-207ENST00000485180 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
USP9X-207ENST00000485180 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
USP9X-207ENST00000485180 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
USP9X-207ENST00000485180 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 C8AP07357 584 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 ZGLP1P0C6A0 271 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 IMPDH2P12268 514 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 RAC2P15153 192 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 ERVFC1P60507 584 aa12.82□□□□□ -0.36
USP9X-207ENST00000485180 METTL16Q86W50 562 aaKnown RBP12.82□□□□□ -0.36
USP9X-207ENST00000485180 FARP2O94887 1054 aaPredicted RBP12.81□□□□□ -0.36
USP9X-207ENST00000485180 TEKQ02763 1124 aa12.81□□□□□ -0.36
USP9X-207ENST00000485180 TMEM192Q8IY95 271 aa12.81□□□□□ -0.36
USP9X-207ENST00000485180 LIN37Q96GY3 246 aaPredicted RBP12.81□□□□□ -0.36
USP9X-207ENST00000485180 SLC9A7Q96T83 725 aa12.81□□□□□ -0.36
USP9X-207ENST00000485180 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
USP9X-207ENST00000485180 ZNF648Q5T619 568 aaPredicted RBP12.8□□□□□ -0.36
USP9X-207ENST00000485180 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
USP9X-207ENST00000485180 ZNF654Q8IZM8 581 aa12.8□□□□□ -0.36
USP9X-207ENST00000485180 PDZD8Q8NEN9 1154 aa12.8□□□□□ -0.36
USP9X-207ENST00000485180 ABHD4Q8TB40 342 aa12.8□□□□□ -0.36
USP9X-207ENST00000485180 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
USP9X-207ENST00000485180 SLC6A18Q96N87 628 aa12.8□□□□□ -0.36
USP9X-207ENST00000485180 MLANAQ16655 118 aa12.79□□□□□ -0.36
USP9X-207ENST00000485180 DAGLBQ8NCG7 672 aa12.79□□□□□ -0.36
USP9X-207ENST00000485180 MYLIPQ8WY64 445 aa12.79□□□□□ -0.36
USP9X-207ENST00000485180 SP110Q9HB58 689 aa12.79□□□□□ -0.36
USP9X-207ENST00000485180 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
USP9X-207ENST00000485180 RGS22Q8NE09 1264 aa12.78□□□□□ -0.36
USP9X-207ENST00000485180 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
USP9X-207ENST00000485180 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
USP9X-207ENST00000485180 FERD3LQ96RJ6 166 aa12.78□□□□□ -0.36
USP9X-207ENST00000485180 KIAA1522Q9P206 1035 aaPredicted RBP12.78□□□□□ -0.36
USP9X-207ENST00000485180 ACRP10323 421 aa12.77□□□□□ -0.37
USP9X-207ENST00000485180 MESP2Q0VG99 397 aa12.77□□□□□ -0.37
USP9X-207ENST00000485180 MPZL3Q6UWV2 235 aa12.77□□□□□ -0.37
USP9X-207ENST00000485180 TAB3Q8N5C8 712 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms