RNA–Protein interactions for RNA: ENST00000485180.1

USP9X-207, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-207ENST00000485180 AEBP2Q6ZN18 517 aaPredicted RBP46.96■■■■■ 5.11
USP9X-207ENST00000485180 CHIC1Q5VXU3 224 aa45.44■■■■■ 4.86
USP9X-207ENST00000485180 SENP3Q9H4L4 574 aaPredicted RBP39.93■■■■□ 3.98
USP9X-207ENST00000485180 PHF23Q9BUL5 403 aaPredicted RBP39.91■■■■□ 3.98
USP9X-207ENST00000485180 FOXD1Q16676 465 aa37.1■■■■□ 3.53
USP9X-207ENST00000485180 PLPPR3Q6T4P5 718 aa36.7■■■■□ 3.47
USP9X-207ENST00000485180 PPP6R1Q9UPN7 881 aa35.34■■■■□ 3.25
USP9X-207ENST00000485180 ADRA2BP18089 450 aa35.27■■■■□ 3.24
USP9X-207ENST00000485180 PIAS4Q8N2W9 510 aaPredicted RBP34.88■■■■□ 3.17
USP9X-207ENST00000485180 MSH5O43196 834 aa34.41■■■■□ 3.1
USP9X-207ENST00000485180 SCAF1Q9H7N4 1312 aaKnown RBP32.27■■■□□ 2.76
USP9X-207ENST00000485180 PPP4R3CPQ6ZMV5 832 aa32.27■■■□□ 2.76
USP9X-207ENST00000485180 MAPK8IP2Q13387 824 aaPredicted RBP32.13■■■□□ 2.73
USP9X-207ENST00000485180 POTEDQ86YR6 584 aa32.11■■■□□ 2.73
USP9X-207ENST00000485180 DMRT2Q9Y5R5 561 aa31.81■■■□□ 2.68
USP9X-207ENST00000485180 CNKSR2Q8WXI2 1034 aa31.48■■■□□ 2.63
USP9X-207ENST00000485180 NCBP3Q53F19 620 aaKnown RBP31.28■■■□□ 2.6
USP9X-207ENST00000485180 KCNA4P22459 653 aa31■■■□□ 2.55
USP9X-207ENST00000485180 HOXD11P31277 338 aaPredicted RBP30.99■■■□□ 2.55
USP9X-207ENST00000485180 RNF216Q9NWF9 866 aaPredicted RBP30.98■■■□□ 2.55
USP9X-207ENST00000485180 NPM3O75607 178 aaKnown RBP30.84■■■□□ 2.53
USP9X-207ENST00000485180 DCAF8L1A6NGE4 600 aa30.39■■■□□ 2.46
USP9X-207ENST00000485180 DNAJC5BQ9UF47 199 aa30.07■■■□□ 2.4
USP9X-207ENST00000485180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.47■■■□□ 2.31
USP9X-207ENST00000485180 SLC4A1APQ9BWU0 796 aaKnown RBP29.44■■■□□ 2.3
USP9X-207ENST00000485180 RNF39Q9H2S5 420 aa29.44■■■□□ 2.3
USP9X-207ENST00000485180 SLC4A2P04920 1241 aa29.24■■■□□ 2.27
USP9X-207ENST00000485180 C1QBPQ07021 282 aaKnown RBP29.06■■■□□ 2.24
USP9X-207ENST00000485180 U3KPZ7 1027 aaPredicted RBP28.99■■■□□ 2.23
USP9X-207ENST00000485180 CACNB1Q02641 598 aaPredicted RBP28.96■■■□□ 2.23
USP9X-207ENST00000485180 FOXD4L1Q9NU39 408 aa28.68■■■□□ 2.18
USP9X-207ENST00000485180 ZBTB22O15209 634 aa28.53■■■□□ 2.16
USP9X-207ENST00000485180 MYCNP04198 464 aaPredicted RBP28.52■■■□□ 2.16
USP9X-207ENST00000485180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
USP9X-207ENST00000485180 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
USP9X-207ENST00000485180 SAMD1Q6SPF0 538 aaPredicted RBP28.34■■■□□ 2.13
USP9X-207ENST00000485180 SPINK5Q9NQ38 1064 aaPredicted RBP28.29■■■□□ 2.12
USP9X-207ENST00000485180 APLP2Q06481 763 aa28.27■■■□□ 2.12
USP9X-207ENST00000485180 CAPN15O75808 1086 aa28.18■■■□□ 2.1
USP9X-207ENST00000485180 EHMT2Q96KQ7 1210 aa28.05■■■□□ 2.08
USP9X-207ENST00000485180 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
USP9X-207ENST00000485180 ZNF219Q9P2Y4 722 aaPredicted RBP27.95■■■□□ 2.06
USP9X-207ENST00000485180 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
USP9X-207ENST00000485180 DSG3P32926 999 aa27.85■■■□□ 2.05
USP9X-207ENST00000485180 ATF5Q9Y2D1 282 aaPredicted RBP27.77■■■□□ 2.04
USP9X-207ENST00000485180 ATXN8OSP0DMR3 200 aa27.73■■■□□ 2.03
USP9X-207ENST00000485180 ABCB7O75027 752 aa27.61■■■□□ 2.01
USP9X-207ENST00000485180 POLA2Q14181 598 aa27.4■■□□□ 1.98
USP9X-207ENST00000485180 ZBTB12Q9Y330 459 aaPredicted RBP26.93■■□□□ 1.9
USP9X-207ENST00000485180 FBLN2P98095 1184 aa26.62■■□□□ 1.85
USP9X-207ENST00000485180 RBM42Q9BTD8 480 aaKnown RBP26.56■■□□□ 1.84
USP9X-207ENST00000485180 MKRN4PQ13434 485 aaPredicted RBP26.55■■□□□ 1.84
USP9X-207ENST00000485180 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
USP9X-207ENST00000485180 SPDYE2BA6NHP3 402 aa26.17■■□□□ 1.78
USP9X-207ENST00000485180 SPDYE6P0CI01 402 aa26.17■■□□□ 1.78
USP9X-207ENST00000485180 SPDYE2Q495Y8 402 aa26.17■■□□□ 1.78
USP9X-207ENST00000485180 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
USP9X-207ENST00000485180 ZNF692Q9BU19 519 aaPredicted RBP25.97■■□□□ 1.75
USP9X-207ENST00000485180 SSUH2Q9Y2M2 353 aa25.94■■□□□ 1.74
USP9X-207ENST00000485180 REM2Q8IYK8 340 aaPredicted RBP25.86■■□□□ 1.73
USP9X-207ENST00000485180 SPDYE4A6NLX3 237 aa25.72■■□□□ 1.71
USP9X-207ENST00000485180 CHRDL2Q6WN34 429 aa25.62■■□□□ 1.69
USP9X-207ENST00000485180 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
USP9X-207ENST00000485180 PITPNM1O00562 1244 aa25.59■■□□□ 1.69
USP9X-207ENST00000485180 SPDYE1Q8NFV5 336 aaPredicted RBP25.5■■□□□ 1.67
USP9X-207ENST00000485180 CLEC11AQ9Y240 323 aa25.38■■□□□ 1.65
USP9X-207ENST00000485180 POTEHQ6S545 545 aa25.33■■□□□ 1.65
USP9X-207ENST00000485180 FKBP8Q14318 412 aa25.31■■□□□ 1.64
USP9X-207ENST00000485180 PROM2Q8N271 834 aa25.28■■□□□ 1.64
USP9X-207ENST00000485180 FXR2P51116 673 aaKnown RBP eCLIP25.21■■□□□ 1.632e-6■■■□□ 16.5
USP9X-207ENST00000485180 PIP4P2Q8N4L2 257 aa25.2■■□□□ 1.62
USP9X-207ENST00000485180 STAG3Q9UJ98 1225 aa25.11■■□□□ 1.61
USP9X-207ENST00000485180 PRR29P0C7W0 189 aa25.1■■□□□ 1.61
USP9X-207ENST00000485180 PRKAR2AP13861 404 aaKnown RBP24.93■■□□□ 1.58
USP9X-207ENST00000485180 CHADLQ6NUI6 762 aa24.82■■□□□ 1.56
USP9X-207ENST00000485180 CREBZFQ9NS37 354 aa24.7■■□□□ 1.54
USP9X-207ENST00000485180 FARP1Q9Y4F1 1045 aaPredicted RBP24.56■■□□□ 1.52
USP9X-207ENST00000485180 FBXO3Q9UK99 471 aa24.55■■□□□ 1.52
USP9X-207ENST00000485180 HAX1O00165 279 aa24.47■■□□□ 1.51
USP9X-207ENST00000485180 MNX1P50219 401 aaPredicted RBP24.41■■□□□ 1.5
USP9X-207ENST00000485180 MIER1Q8N108 512 aa24.41■■□□□ 1.5
USP9X-207ENST00000485180 C19orf67A6NJJ6 358 aa24.37■■□□□ 1.49
USP9X-207ENST00000485180 PLEKHG5O94827 1062 aa24.34■■□□□ 1.49
USP9X-207ENST00000485180 PLCD3Q8N3E9 789 aa24.33■■□□□ 1.49
USP9X-207ENST00000485180 NPM1P06748 294 aaKnown RBP eCLIP24.26■■□□□ 1.47
USP9X-207ENST00000485180 EVX2Q03828 476 aa24.26■■□□□ 1.47
USP9X-207ENST00000485180 VASPP50552 380 aaPredicted RBP24.23■■□□□ 1.47
USP9X-207ENST00000485180 CD44P16070 742 aaKnown RBP24.19■■□□□ 1.46
USP9X-207ENST00000485180 SP7Q8TDD2 431 aaPredicted RBP24.16■■□□□ 1.46
USP9X-207ENST00000485180 ZBTB47Q9UFB7 747 aaPredicted RBP24.12■■□□□ 1.45
USP9X-207ENST00000485180 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
USP9X-207ENST00000485180 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
USP9X-207ENST00000485180 NUBP1P53384 320 aa23.88■■□□□ 1.41
USP9X-207ENST00000485180 ZNF579Q8NAF0 562 aaKnown RBP23.88■■□□□ 1.41
USP9X-207ENST00000485180 IFNLR1Q8IU57 520 aaPredicted RBP23.87■■□□□ 1.41
USP9X-207ENST00000485180 RASEFQ8IZ41 740 aa23.87■■□□□ 1.41
USP9X-207ENST00000485180 KLHL34Q8N239 644 aa23.87■■□□□ 1.41
USP9X-207ENST00000485180 TSPYL2Q9H2G4 693 aaPredicted RBP23.83■■□□□ 1.41
USP9X-207ENST00000485180 GABBR2O75899 941 aa23.77■■□□□ 1.4
USP9X-207ENST00000485180 CLCN6P51797 869 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms