RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 PRMT2P55345 433 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 PTH1RQ03431 593 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 COG2Q14746 738 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
HDLBP-240ENST00000484412 F5H6K3 240 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
HDLBP-240ENST00000484412 PLA2G6O60733 806 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 PRDM1O75626 825 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 CYP2C8P10632 490 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 VCAM1P19320 739 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 KLRC3Q07444 240 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 CTU1Q7Z7A3 348 aaKnown RBP16.52■□□□□ 0.24
HDLBP-240ENST00000484412 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 ESR2Q92731 530 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 LSG1Q9H089 658 aaKnown RBP16.52■□□□□ 0.24
HDLBP-240ENST00000484412 CNNM2Q9H8M5 875 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 INCENPQ9NQS7 918 aa16.52■□□□□ 0.24
HDLBP-240ENST00000484412 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 CDC45O75419 566 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
HDLBP-240ENST00000484412 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 KIAA1211Q6ZU35 1233 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 FEZ1Q99689 392 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 KRT23Q9C075 422 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 RBPJLQ9UBG7 517 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
HDLBP-240ENST00000484412 CYP21A2P08686 494 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 FDX1P10109 184 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 DSG3P32926 999 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 HERVK_113P62684 666 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 ZSWIM5Q9P217 1185 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
HDLBP-240ENST00000484412 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
HDLBP-240ENST00000484412 HOXD10P28358 340 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-240ENST00000484412 DGKZQ13574 1117 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 KIF22Q14807 665 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 TBC1D10CQ8IV04 446 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
HDLBP-240ENST00000484412 GMCL1Q96IK5 515 aa16.49■□□□□ 0.23
HDLBP-240ENST00000484412 HAND2P61296 217 aa16.48■□□□□ 0.23
HDLBP-240ENST00000484412 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
HDLBP-240ENST00000484412 GPRC5AQ8NFJ5 357 aa16.48■□□□□ 0.23
HDLBP-240ENST00000484412 KCNB2Q92953 911 aa16.48■□□□□ 0.23
HDLBP-240ENST00000484412 RPAP3Q9H6T3 665 aaPredicted RBP16.48■□□□□ 0.23
HDLBP-240ENST00000484412 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
HDLBP-240ENST00000484412 ATP2A1O14983 1001 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
HDLBP-240ENST00000484412 Q3C1V9 767 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 FBXO46Q6PJ61 603 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-240ENST00000484412 OTOP1Q7RTM1 612 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
HDLBP-240ENST00000484412 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 RLFQ13129 1914 aa16.47■□□□□ 0.23
HDLBP-240ENST00000484412 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
HDLBP-240ENST00000484412 CAP1Q01518 475 aa16.46■□□□□ 0.23
HDLBP-240ENST00000484412 FEM1BQ9UK73 627 aa16.46■□□□□ 0.23
HDLBP-240ENST00000484412 PTPN22Q9Y2R2 807 aa16.46■□□□□ 0.23
HDLBP-240ENST00000484412 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
HDLBP-240ENST00000484412 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
HDLBP-240ENST00000484412 E7EWF7 191 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
HDLBP-240ENST00000484412 CNMDO75829 334 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 NDUFB10O96000 172 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 CTGFP29279 349 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 PSMC4P43686 418 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 TRDNQ13061 729 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 IRF5Q13568 498 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
HDLBP-240ENST00000484412 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 CLEC10AQ8IUN9 316 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 SHCBP1Q8NEM2 672 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 CD99L2Q8TCZ2 262 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 TMEM47Q9BQJ4 181 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
HDLBP-240ENST00000484412 KDM4AO75164 1064 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 BMP3P12645 472 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 MAPK4P31152 587 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 FCGRTP55899 365 aa16.44■□□□□ 0.22
HDLBP-240ENST00000484412 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms