RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 PHTF2Q8N3S3 785 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 NEUROD6Q96NK8 337 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 GMLQ99445 158 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 ATXN7L1Q9ULK2 861 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-207ENST00000483969 UTRNP46939 3433 aa10.96□□□□□ -0.66
COL8A1-207ENST00000483969 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
COL8A1-207ENST00000483969 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-207ENST00000483969 AAMPQ13685 434 aa10.95□□□□□ -0.66
COL8A1-207ENST00000483969 TBC1D22AQ8WUA7 517 aa10.95□□□□□ -0.66
COL8A1-207ENST00000483969 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
COL8A1-207ENST00000483969 MSTNO14793 375 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 RAB11FIP3O75154 756 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 MSX1P28360 303 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 CHAF1AQ13111 956 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-207ENST00000483969 IRF5Q13568 498 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
COL8A1-207ENST00000483969 TBC1D10BQ4KMP7 808 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-207ENST00000483969 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 PGAP2Q9UHJ9 254 aa10.94□□□□□ -0.66
COL8A1-207ENST00000483969 SUPT16HQ9Y5B9 1047 aaKnown RBP10.94□□□□□ -0.66
COL8A1-207ENST00000483969 HIRAP54198 1017 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-207ENST00000483969 KIF4BQ2VIQ3 1234 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 CCDC158Q5M9N0 1113 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 GOLGA6L1Q8N7Z2 621 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 DCPSQ96C86 337 aaKnown RBP10.93□□□□□ -0.66
COL8A1-207ENST00000483969 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 CRISPLD1Q9H336 500 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 DENND2AQ9ULE3 1009 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 IQSEC3Q9UPP2 1182 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-207ENST00000483969 SBF1O95248 1867 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
COL8A1-207ENST00000483969 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 TAF1P21675 1872 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 HSPA6P17066 643 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 DLGAP5Q15398 846 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 MAP1SQ66K74 1059 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-207ENST00000483969 CDC37L1Q7L3B6 337 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 KIF1BPQ96EK5 621 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 CRBNQ96SW2 442 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 ZNF609O15014 1411 aa10.92□□□□□ -0.66
COL8A1-207ENST00000483969 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
COL8A1-207ENST00000483969 ADORA1P30542 326 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 PHKA1P46020 1223 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 TBC1D9Q6ZT07 1266 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
COL8A1-207ENST00000483969 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
COL8A1-207ENST00000483969 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
COL8A1-207ENST00000483969 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 MRIQ9BWK5 157 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 MKL2Q9ULH7 1088 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 TTF2Q9UNY4 1162 aaKnown RBP10.91□□□□□ -0.66
COL8A1-207ENST00000483969 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
COL8A1-207ENST00000483969 MYO1BO43795 1136 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 BMP4P12644 408 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 RBM5P52756 815 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL8A1-207ENST00000483969 HDLBPQ00341 1268 aaKnown RBP10.9□□□□□ -0.66
COL8A1-207ENST00000483969 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 TTC39AQ5SRH9 613 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 SPTY2D1Q68D10 685 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-207ENST00000483969 FIGNL1Q6PIW4 674 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 SLCO4C1Q6ZQN7 724 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 C1orf216Q8TAB5 229 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 SPOCK3Q9BQ16 436 aa10.9□□□□□ -0.66
COL8A1-207ENST00000483969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-207ENST00000483969 MYH3P11055 1940 aa10.9□□□□□ -0.67
COL8A1-207ENST00000483969 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 MAST3O60307 1309 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 SHISA8B8ZZ34 492 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 WNT10BO00744 389 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 EGFRP00533 1210 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 IFIT2P09913 472 aaKnown RBP10.89□□□□□ -0.67
COL8A1-207ENST00000483969 FGFR3P22607 806 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 PLA2G4AP47712 749 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 GALNT6Q8NCL4 622 aa10.89□□□□□ -0.67
COL8A1-207ENST00000483969 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-207ENST00000483969 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms