RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 CNTNAP5Q8WYK1 1306 aa18.82■□□□□ 0.6
RFTN1-209ENST00000483671 ANGEL2Q5VTE6 544 aaKnown RBP18.82■□□□□ 0.6
RFTN1-209ENST00000483671 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
RFTN1-209ENST00000483671 ALG1Q9BT22 464 aa18.82■□□□□ 0.6
RFTN1-209ENST00000483671 ZSCAN16Q9H4T2 348 aaPredicted RBP18.82■□□□□ 0.6
RFTN1-209ENST00000483671 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
RFTN1-209ENST00000483671 GLTPD2A6NH11 291 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 DDX11L8A8MPP1 907 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 PHF20L1A8MW92 1017 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 GH2P01242 217 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 PDHBP11177 359 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 ICA1Q05084 483 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 SEPT2Q15019 361 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 SIAH1Q8IUQ4 282 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 GGA3Q9NZ52 723 aa18.81■□□□□ 0.6
RFTN1-209ENST00000483671 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 GDF11O95390 407 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 PARP1P09874 1014 aaKnown RBP18.8■□□□□ 0.6
RFTN1-209ENST00000483671 EEF2P13639 858 aaKnown RBP18.8■□□□□ 0.6
RFTN1-209ENST00000483671 PTMSP20962 102 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 CAP2P40123 477 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 JAG1P78504 1218 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 RESTQ13127 1097 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 USP50Q70EL3 339 aaPredicted RBP18.8■□□□□ 0.6
RFTN1-209ENST00000483671 CLEC10AQ8IUN9 316 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 FAM177A1Q8N128 213 aaPredicted RBP18.8■□□□□ 0.6
RFTN1-209ENST00000483671 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 ZBTB21Q9ULJ3 1066 aa18.8■□□□□ 0.6
RFTN1-209ENST00000483671 AKAP17AQ02040 695 aaKnown RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 PKN1Q16512 942 aa18.79■□□□□ 0.6
RFTN1-209ENST00000483671 SHROOM1Q2M3G4 852 aaPredicted RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 FOXD4L5Q5VV16 416 aaPredicted RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 DCAF15Q66K64 600 aa18.79■□□□□ 0.6
RFTN1-209ENST00000483671 CMTR1Q8N1G2 835 aaKnown RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
RFTN1-209ENST00000483671 ZC3H15Q8WU90 426 aaKnown RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 FOXD4L4Q8WXT5 416 aaPredicted RBP18.79■□□□□ 0.6
RFTN1-209ENST00000483671 UTRNP46939 3433 aa18.79■□□□□ 0.6
RFTN1-209ENST00000483671 GOLGA6L22H0YM25 854 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 ASNSP08243 561 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
RFTN1-209ENST00000483671 MIGA2Q7L4E1 593 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 AIFM3Q96NN9 605 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 ZNF112Q9UJU3 913 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
RFTN1-209ENST00000483671 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 SCN4AP35499 1836 aa18.78■□□□□ 0.6
RFTN1-209ENST00000483671 USP17L5A8MUK1 530 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 KLRF2D3W0D1 207 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 ZNF543Q08ER8 600 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 TRIM29Q14134 588 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 PFKFB3Q16875 520 aaPredicted RBP18.77■□□□□ 0.6
RFTN1-209ENST00000483671 SLC35G1Q2M3R5 365 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 KRT40Q6A162 431 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 GMCL1Q96IK5 515 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 WDR90Q96KV7 1748 aa18.77■□□□□ 0.6
RFTN1-209ENST00000483671 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 UBE2Q2LH0YL09 131 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 CTNND1O60716 968 aaKnown RBP18.76■□□□□ 0.59
RFTN1-209ENST00000483671 XBP1P17861 261 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 NBPF12Q5TAG4 269 aaPredicted RBP18.76■□□□□ 0.59
RFTN1-209ENST00000483671 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 CCDC82Q8N4S0 544 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 TMEM87AQ8NBN3 555 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 ZNF341Q9BYN7 854 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 RIOX1Q9H6W3 641 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 ARHGEF10LQ9HCE6 1279 aa18.76■□□□□ 0.59
RFTN1-209ENST00000483671 CYTH3O43739 400 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 SCG2P13521 617 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 EPHX2P34913 555 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 KIF23Q02241 960 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-209ENST00000483671 SUPT20HL1Q3ZLR7 823 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 BRAPQ7Z569 592 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 FERMT3Q86UX7 667 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 SCAF8Q9UPN6 1271 aaKnown RBP18.75■□□□□ 0.59
RFTN1-209ENST00000483671 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 MYH6P13533 1939 aa18.75■□□□□ 0.59
RFTN1-209ENST00000483671 MMP1P03956 469 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 U2AF2P26368 475 aaKnown RBP eCLIP18.74■□□□□ 0.59
RFTN1-209ENST00000483671 ATP2B2Q01814 1243 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 GUCY1B3Q02153 619 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 OTUD7BQ6GQQ9 843 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
RFTN1-209ENST00000483671 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 SSC5DA1L4H1 1573 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 A0A1W2PRG0 241 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 F5H6K3 240 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 GOLGA8HP0CJ92 632 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 FOSBP53539 338 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 KLRC3Q07444 240 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 MCTP1Q6DN14 999 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 PHF20Q9BVI0 1012 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms