RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ESR2Q92731 530 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 CEP95Q96GE4 821 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 NBPF3Q9H094 633 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 CNNM2Q9H8M5 875 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 TCP11L1Q9NUJ3 509 aa18.46■□□□□ 0.55
RPP40-206ENST00000483546 WDR46O15213 610 aaKnown RBP18.45■□□□□ 0.54
RPP40-206ENST00000483546 BCRP11274 1271 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 ATP2B2Q01814 1243 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 DGKZQ13574 1117 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 KIF22Q14807 665 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 TBC1D10CQ8IV04 446 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 KRT23Q9C075 422 aa18.45■□□□□ 0.54
RPP40-206ENST00000483546 GNRH1P01148 92 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 NOVP48745 357 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 PTH1RQ03431 593 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 PKN2Q16513 984 aaKnown RBP18.44■□□□□ 0.54
RPP40-206ENST00000483546 FAM110CQ1W6H9 321 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 CCDC178Q5BJE1 867 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 CTU1Q7Z7A3 348 aaKnown RBP18.44■□□□□ 0.54
RPP40-206ENST00000483546 CPA4Q9UI42 421 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 TACC3Q9Y6A5 838 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 MYPNQ86TC9 1320 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 PARP14Q460N5 1801 aa18.44■□□□□ 0.54
RPP40-206ENST00000483546 MGAMO43451 1857 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 HERVK_113P62684 666 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 LACTBP83111 547 aaPredicted RBP18.43■□□□□ 0.54
RPP40-206ENST00000483546 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
RPP40-206ENST00000483546 COL13A1Q5TAT6 717 aaPredicted RBP18.43■□□□□ 0.54
RPP40-206ENST00000483546 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 GMCL1P1Q8NEA9 526 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 TTC14Q96N46 770 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
RPP40-206ENST00000483546 RPAP3Q9H6T3 665 aaPredicted RBP18.43■□□□□ 0.54
RPP40-206ENST00000483546 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
RPP40-206ENST00000483546 IQCA1Q86XH1 822 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 HOXC10Q9NYD6 342 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
RPP40-206ENST00000483546 RLFQ13129 1914 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 NEDD4P46934 1319 aa18.42■□□□□ 0.54
RPP40-206ENST00000483546 F5H6K3 240 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 CYP21A2P08686 494 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 KLRC3Q07444 240 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 TRDNQ13061 729 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 COG2Q14746 738 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
RPP40-206ENST00000483546 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
RPP40-206ENST00000483546 A0A0G2JMZ2 1700 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 PRMT2P55345 433 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 SPICE1Q8N0Z3 855 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 ANKRD13CQ8N6S4 541 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 CD99L2Q8TCZ2 262 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 RABGAP1Q9Y3P9 1069 aa18.4■□□□□ 0.54
RPP40-206ENST00000483546 KDM4AO75164 1064 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 NDUFB10O96000 172 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 TOP1P11387 765 aaKnown RBP18.39■□□□□ 0.53
RPP40-206ENST00000483546 KIAA1755Q5JYT7 1200 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 RNF20Q5VTR2 975 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 MB21D1Q8N884 522 aa18.39■□□□□ 0.53
RPP40-206ENST00000483546 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
RPP40-206ENST00000483546 B4E1Z4 1266 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 EPB41L2O43491 1005 aaKnown RBP18.38■□□□□ 0.53
RPP40-206ENST00000483546 NMT2O60551 498 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 FLOT1O75955 427 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 REC8O95072 547 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 HOXD10P28358 340 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 FCGRTP55899 365 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
RPP40-206ENST00000483546 TNS4Q8IZW8 715 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 LRRC47Q8N1G4 583 aaKnown RBP18.38■□□□□ 0.53
RPP40-206ENST00000483546 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 GMCL1Q96IK5 515 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 TRIM17Q9Y577 477 aa18.38■□□□□ 0.53
RPP40-206ENST00000483546 RAD21O60216 631 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 DSG3P32926 999 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 PSMC4P43686 418 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 CCNA1P78396 465 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 FBXO46Q6PJ61 603 aaPredicted RBP18.37■□□□□ 0.53
RPP40-206ENST00000483546 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 RBPJLQ9UBG7 517 aa18.37■□□□□ 0.53
RPP40-206ENST00000483546 E7EWF7 191 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
RPP40-206ENST00000483546 ERVK-9P63128 1117 aa18.36■□□□□ 0.53
RPP40-206ENST00000483546 ERVK-24P63145 666 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms