RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CTDSPL2Q05D32 466 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 KIAA1755Q5JYT7 1200 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 LBX2Q6XYB7 198 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 IL25Q9H293 177 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 RPAP3Q9H6T3 665 aaPredicted RBP21.39■■□□□ 1.01
HDAC6-225ENST00000483506 SYNPO2Q9UMS6 1093 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 TACC3Q9Y6A5 838 aa21.39■■□□□ 1.01
HDAC6-225ENST00000483506 MYH4Q9Y623 1939 aa21.38■■□□□ 1.01
HDAC6-225ENST00000483506 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
HDAC6-225ENST00000483506 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
HDAC6-225ENST00000483506 PARP14Q460N5 1801 aa21.38■■□□□ 1.01
HDAC6-225ENST00000483506 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
HDAC6-225ENST00000483506 PCP11498 1178 aaKnown RBP21.37■■□□□ 1.01
HDAC6-225ENST00000483506 FCGRTP55899 365 aa21.37■■□□□ 1.01
HDAC6-225ENST00000483506 MKL1Q969V6 931 aa21.37■■□□□ 1.01
HDAC6-225ENST00000483506 NBPF3Q9H094 633 aa21.37■■□□□ 1.01
HDAC6-225ENST00000483506 MTMR4Q9NYA4 1195 aa21.37■■□□□ 1.01
HDAC6-225ENST00000483506 A0A0G2JMZ2 1700 aa21.37■■□□□ 1.01
HDAC6-225ENST00000483506 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 TFAP4Q01664 338 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 RUFY2Q8WXA3 655 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 CEP95Q96GE4 821 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 GOPCQ9HD26 462 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 TXNRD2Q9NNW7 524 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 RBPJLQ9UBG7 517 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 SRRDQ9UH36 339 aa21.36■■□□□ 1.01
HDAC6-225ENST00000483506 SPDYE16A6NNV3 312 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-225ENST00000483506 FMNL1O95466 1100 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-225ENST00000483506 HOXD10P28358 340 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 BMP2KLQ5H9B9 411 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 FAM47AQ5JRC9 791 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 STAG1Q8WVM7 1258 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 INCENPQ9NQS7 918 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 RABGAP1Q9Y3P9 1069 aa21.35■■□□□ 1.01
HDAC6-225ENST00000483506 MYPNQ86TC9 1320 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 TTLL1O95922 423 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 NOVP48745 357 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 NT5C2P49902 561 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 ATP2B2Q01814 1243 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 PPP4R3BQ5MIZ7 849 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 GPRC5AQ8NFJ5 357 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 PTCH2Q9Y6C5 1203 aa21.34■■□□□ 1.01
HDAC6-225ENST00000483506 DOCK3Q8IZD9 2030 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 SGSM2O43147 1006 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 CNMDO75829 334 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 HAND2P61296 217 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 ERVK-9P63128 1117 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 ERVK-24P63145 666 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 COG2Q14746 738 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 AKNAD1Q5T1N1 836 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 SKAP1Q86WV1 359 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 TBC1D10CQ8IV04 446 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 SPICE1Q8N0Z3 855 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 ARMC5Q96C12 935 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 TANGO6Q9C0B7 1094 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 HOXC10Q9NYD6 342 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 CTNNA3Q9UI47 895 aa21.33■■□□□ 1.01
HDAC6-225ENST00000483506 CENPFP49454 3210 aa21.33■■□□□ 1
HDAC6-225ENST00000483506 TSPY2A6NKD2 308 aa21.32■■□□□ 1
HDAC6-225ENST00000483506 GMCL1P1Q8NEA9 526 aa21.32■■□□□ 1
HDAC6-225ENST00000483506 RNF41Q9H4P4 317 aaPredicted RBP21.32■■□□□ 1
HDAC6-225ENST00000483506 IL17RBQ9NRM6 502 aa21.32■■□□□ 1
HDAC6-225ENST00000483506 CLIP2Q9UDT6 1046 aa21.32■■□□□ 1
HDAC6-225ENST00000483506 F5H6K3 240 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 ZNF213O14771 459 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 TNPO2O14787 897 aaKnown RBP21.31■■□□□ 1
HDAC6-225ENST00000483506 RANBP6O60518 1105 aaKnown RBP21.31■■□□□ 1
HDAC6-225ENST00000483506 DSG3P32926 999 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 PRKCZQ05513 592 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 KLRC3Q07444 240 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 MFSD6Q6ZSS7 791 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 TCP11L1Q9NUJ3 509 aa21.31■■□□□ 1
HDAC6-225ENST00000483506 CCDC85CA6NKD9 419 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 NDUFB10O96000 172 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 IRF5Q13568 498 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 Q3C1V9 767 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 MB21D1Q8N884 522 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 COA7Q96BR5 231 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 ADAMTS5Q9UNA0 930 aa21.3■■□□□ 1
HDAC6-225ENST00000483506 PLXNB2O15031 1838 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 PEX10O60683 326 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 FLOT1O75955 427 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 MAPK4P31152 587 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 IMMTQ16891 758 aaKnown RBP21.29■■□□□ 1
HDAC6-225ENST00000483506 PAGR1Q9BTK6 254 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 BTBD7Q9P203 1132 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 GABRQQ9UN88 632 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 NEDD4P46934 1319 aa21.29■■□□□ 1
HDAC6-225ENST00000483506 NMT2O60551 498 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 CAPN15O75808 1086 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 ECM2O94769 699 aaPredicted RBP21.28■■□□□ 1
HDAC6-225ENST00000483506 CCNA1P78396 465 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 FAM83BQ5T0W9 1011 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 LRRC47Q8N1G4 583 aaKnown RBP21.28■■□□□ 1
HDAC6-225ENST00000483506 PORCNQ9H237 461 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 PPP4R2Q9NY27 417 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 GJD2Q9UKL4 321 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 PPP1R9AQ9ULJ8 1098 aa21.28■■□□□ 1
HDAC6-225ENST00000483506 RBBP6Q7Z6E9 1792 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms