RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ARRDC4Q8NCT1 418 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 ANTXR1Q9H6X2 564 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 ATP11BQ9Y2G3 1177 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 NOP58Q9Y2X3 529 aaKnown RBP8.99□□□□□ -0.97
CSDE1-206ENST00000483030 A0A1W2PRG0 241 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 STRNO43815 780 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 COBLO75128 1261 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 IGHA2P01877 340 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 POLR3DP05423 398 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-206ENST00000483030 CYBAP13498 195 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 ADORA2AP29274 412 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 COG2Q14746 738 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 SHHQ15465 462 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 PRAMEF19Q5SWL8 479 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 SLC39A5Q6ZMH5 540 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 RIOK1Q9BRS2 568 aaKnown RBP8.98□□□□□ -0.97
CSDE1-206ENST00000483030 MOV10L1Q9BXT6 1211 aaKnown RBP8.98□□□□□ -0.97
CSDE1-206ENST00000483030 HOXC10Q9NYD6 342 aa8.98□□□□□ -0.97
CSDE1-206ENST00000483030 SIPA1L1O43166 1804 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 KBTBD13C9JR72 458 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 MPHOSPH10O00566 681 aaKnown RBP8.97□□□□□ -0.97
CSDE1-206ENST00000483030 ERCC3P19447 782 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.977e-7■□□□□ 10.7
CSDE1-206ENST00000483030 EVX2Q03828 476 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 GABPAQ06546 454 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 C9orf50Q5SZB4 431 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 OLFML2BQ68BL8 750 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 BADQ92934 168 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 CDX2Q99626 313 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-206ENST00000483030 TANGO6Q9C0B7 1094 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 SPATC1LQ9H0A9 340 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 SEMA6BQ9H3T3 888 aa8.97□□□□□ -0.97
CSDE1-206ENST00000483030 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-206ENST00000483030 SEPT4O43236 478 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 PLS1Q14651 629 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 TRIM60Q495X7 471 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 KIAA1755Q5JYT7 1200 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 SLC9C2Q5TAH2 1124 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 SH3RF1Q7Z6J0 888 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 AACSQ86V21 672 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 ITPRIPQ8IWB1 547 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 SHCBP1Q8NEM2 672 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 FERMT2Q96AC1 680 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 MCM9Q9NXL9 1143 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 ATAD5Q96QE3 1844 aa8.96□□□□□ -0.98
CSDE1-206ENST00000483030 TRIM43BA6NCK2 446 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 CYP2D6P10635 497 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 RLBP1P12271 317 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 PDE6AP16499 860 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 LRRC41Q15345 812 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 TMED8Q6PL24 325 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-206ENST00000483030 NCAPG2Q86XI2 1143 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 SIAH1Q8IUQ4 282 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 FTSJ3Q8IY81 847 aaKnown RBP8.95□□□□□ -0.98
CSDE1-206ENST00000483030 SPICE1Q8N0Z3 855 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 MB21D1Q8N884 522 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 SLC44A5Q8NCS7 719 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 TRIM43Q96BQ3 446 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-206ENST00000483030 CRNKL1Q9BZJ0 848 aaKnown RBP8.95□□□□□ -0.98
CSDE1-206ENST00000483030 MROH8Q9H579 483 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 SLC5A4Q9NY91 659 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 EXOC6BQ9Y2D4 811 aa8.95□□□□□ -0.98
CSDE1-206ENST00000483030 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-206ENST00000483030 FLOT1O75955 427 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 FCER1AP12319 257 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 TLE2Q04725 743 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 SNX17Q15036 470 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 TTF1Q15361 905 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-206ENST00000483030 FAM47AQ5JRC9 791 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 TMEM179Q6ZVK1 233 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 CLEC10AQ8IUN9 316 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 ABRAQ8N0Z2 381 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 MAFAQ8NHW3 353 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-206ENST00000483030 MYLIPQ8WY64 445 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 ATG4CQ96DT6 458 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 DYNLL2Q96FJ2 89 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 MAML3Q96JK9 1138 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 BCL11AQ9H165 835 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 TTYH1Q9H313 450 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-206ENST00000483030 IL1RAPL2Q9NP60 686 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 DCP1AQ9NPI6 582 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-206ENST00000483030 PDLIM7Q9NR12 457 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 TACC3Q9Y6A5 838 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 ZNF532Q9HCE3 1301 aa8.94□□□□□ -0.98
CSDE1-206ENST00000483030 CCER2I3L3R5 266 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 GOLIM4O00461 696 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 PGK1P00558 417 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 PGK2P07205 417 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 AKR1B1P15121 316 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 ITGB8P26012 769 aa8.93□□□□□ -0.98
CSDE1-206ENST00000483030 SMAD3P84022 425 aaKnown RBP8.93□□□□□ -0.98
CSDE1-206ENST00000483030 MKRN4PQ13434 485 aaPredicted RBP8.93□□□□□ -0.98
CSDE1-206ENST00000483030 TMEM132BQ14DG7 1078 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms