RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 VCPKMTQ9H867 229 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
VARS-225ENST00000482996 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 SLC34A2O95436 690 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 EEF2P13639 858 aaKnown RBP16.54■□□□□ 0.24
VARS-225ENST00000482996 PDE4BQ07343 736 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 COG2Q14746 738 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 LBX2Q6XYB7 198 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 SIAH1Q8IUQ4 282 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
VARS-225ENST00000482996 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
VARS-225ENST00000482996 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
VARS-225ENST00000482996 PEX10O60683 326 aa16.53■□□□□ 0.24
VARS-225ENST00000482996 PPARAQ07869 468 aa16.53■□□□□ 0.24
VARS-225ENST00000482996 Q3C1V9 767 aa16.53■□□□□ 0.24
VARS-225ENST00000482996 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
VARS-225ENST00000482996 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
VARS-225ENST00000482996 PRDM1O75626 825 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 ELNP15502 786 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
VARS-225ENST00000482996 MTFR1Q15390 333 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 SOCS4Q8WXH5 440 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 NUDT12Q9BQG2 462 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.24
VARS-225ENST00000482996 GJD2Q9UKL4 321 aa16.52■□□□□ 0.24
VARS-225ENST00000482996 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 RAD21O60216 631 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 CNMDO75829 334 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 FLOT1O75955 427 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 INHAP05111 366 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 CCL5P13501 91 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
VARS-225ENST00000482996 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
VARS-225ENST00000482996 ALX1Q15699 326 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 PLEKHH3Q7Z736 793 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 RNF208Q9H0X6 261 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 PORCNQ9H237 461 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 NYAP2Q9P242 653 aa16.51■□□□□ 0.23
VARS-225ENST00000482996 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
VARS-225ENST00000482996 HIP1O00291 1037 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 SDSP20132 328 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 DSG3P32926 999 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 BTBD7Q9P203 1132 aa16.5■□□□□ 0.23
VARS-225ENST00000482996 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
VARS-225ENST00000482996 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 FOXP2O15409 715 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 HMGCRP04035 888 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 GJB1P08034 283 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 CYP2B6P20813 491 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
VARS-225ENST00000482996 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
VARS-225ENST00000482996 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 CLIP2Q9UDT6 1046 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
VARS-225ENST00000482996 XRCC5P13010 732 aaKnown RBP16.48■□□□□ 0.23
VARS-225ENST00000482996 RGS2P41220 211 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 TFAP4Q01664 338 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 UNC93B1Q9H1C4 597 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 MTMR4Q9NYA4 1195 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
VARS-225ENST00000482996 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
VARS-225ENST00000482996 F5H6K3 240 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 TTLL1O95922 423 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 FGAP02671 866 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
VARS-225ENST00000482996 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 KLRC3Q07444 240 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 MORN1Q5T089 497 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
VARS-225ENST00000482996 ATG4CQ96DT6 458 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 SPATC1LQ9H0A9 340 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
VARS-225ENST00000482996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
VARS-225ENST00000482996 ZMYM6O95789 1325 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
VARS-225ENST00000482996 NDUFB10O96000 172 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms