RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 ADD2P35612 726 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 PLCD1P51178 756 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 ZSCAN25Q6NSZ9 544 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 USP17L2Q6R6M4 530 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 DCTPP1Q9H773 170 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 MCM9Q9NXL9 1143 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 BIN2Q9UBW5 565 aaPredicted RBP15.44■□□□□ 0.06
COL21A1-209ENST00000482933 GABRQQ9UN88 632 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 PDE4DIPQ5VU43 2346 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
COL21A1-209ENST00000482933 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
COL21A1-209ENST00000482933 FLT3LGP49771 235 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 IRF5Q13568 498 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 ABCB5Q2M3G0 1257 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
COL21A1-209ENST00000482933 LCORLQ8N3X6 602 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 PXYLP1Q8TE99 480 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 GTF3C2Q8WUA4 911 aaPredicted RBP15.43■□□□□ 0.06
COL21A1-209ENST00000482933 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
COL21A1-209ENST00000482933 SLC4A5Q9BY07 1137 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
COL21A1-209ENST00000482933 ADCY3O60266 1144 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 USP14P54578 494 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 RAB3GAP1Q15042 981 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 UBE3CQ15386 1083 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 MTFR1Q15390 333 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 GPATCH3Q96I76 525 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 FEZ1Q99689 392 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
COL21A1-209ENST00000482933 BRCA2P51587 3418 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 SHMT1P34896 483 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 GABPAQ06546 454 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 CAMK2BQ13554 666 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 AMOTL1Q8IY63 956 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 ZDHHC16Q969W1 377 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 P2RX7Q99572 595 aaKnown RBP15.42■□□□□ 0.06
COL21A1-209ENST00000482933 ARMT1Q9H993 441 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 MORF4L1Q9UBU8 362 aa15.42■□□□□ 0.06
COL21A1-209ENST00000482933 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
COL21A1-209ENST00000482933 MBD4O95243 580 aa15.41■□□□□ 0.06
COL21A1-209ENST00000482933 HERVK_113P62684 666 aa15.41■□□□□ 0.06
COL21A1-209ENST00000482933 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
COL21A1-209ENST00000482933 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
COL21A1-209ENST00000482933 SWAP70Q9UH65 585 aa15.41■□□□□ 0.06
COL21A1-209ENST00000482933 GJB1P08034 283 aa15.4■□□□□ 0.06
COL21A1-209ENST00000482933 CCL5P13501 91 aa15.4■□□□□ 0.06
COL21A1-209ENST00000482933 GPRC5AQ8NFJ5 357 aa15.4■□□□□ 0.06
COL21A1-209ENST00000482933 KIAA1683Q9H0B3 1180 aa15.4■□□□□ 0.06
COL21A1-209ENST00000482933 MYH7P12883 1935 aa15.4■□□□□ 0.06
COL21A1-209ENST00000482933 USP17L15C9J2P7 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L13C9JLJ4 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L11C9JVI0 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L18D6R9N7 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L22D6RA61 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L17D6RBQ6 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L19D6RCP7 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L20D6RJB6 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 MPHOSPH10O00566 681 aaKnown RBP15.39■□□□□ 0.05
COL21A1-209ENST00000482933 CAPN2P17655 700 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 GJA8P48165 433 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
COL21A1-209ENST00000482933 USP17L24Q0WX57 530 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 ZYXQ15942 572 aaKnown RBP15.39■□□□□ 0.05
COL21A1-209ENST00000482933 HCSTQ9UBK5 93 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 DOCK3Q8IZD9 2030 aa15.39■□□□□ 0.05
COL21A1-209ENST00000482933 PRKAB2O43741 272 aa15.38■□□□□ 0.05
COL21A1-209ENST00000482933 INHAP05111 366 aa15.38■□□□□ 0.05
COL21A1-209ENST00000482933 SLFNL1Q499Z3 407 aa15.38■□□□□ 0.05
COL21A1-209ENST00000482933 CCAR1Q8IX12 1150 aaKnown RBP15.38■□□□□ 0.05
COL21A1-209ENST00000482933 VPS9D1Q9Y2B5 631 aa15.38■□□□□ 0.05
COL21A1-209ENST00000482933 SLC4A4Q9Y6R1 1079 aa15.38■□□□□ 0.05
COL21A1-209ENST00000482933 MKI67P46013 3256 aaKnown RBP15.38■□□□□ 0.05
COL21A1-209ENST00000482933 ELNP15502 786 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 MAPK4P31152 587 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 ERVK-24P63145 666 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 SEPT2Q15019 361 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 CATSPERGQ6ZRH7 1159 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 TMEM179Q6ZVK1 233 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 KBTBD3Q8NAB2 608 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 ACER1Q8TDN7 264 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 PUS7LQ9H0K6 701 aaKnown RBP15.37■□□□□ 0.05
COL21A1-209ENST00000482933 TXNRD2Q9NNW7 524 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 RBPJLQ9UBG7 517 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 PCDHB15Q9Y5E8 787 aa15.37■□□□□ 0.05
COL21A1-209ENST00000482933 ERC2O15083 957 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
COL21A1-209ENST00000482933 CYP2D6P10635 497 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 VCAM1P19320 739 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
COL21A1-209ENST00000482933 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
COL21A1-209ENST00000482933 U2AF1L4Q8WU68 220 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms