RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 SRGAP2O75044 1071 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
RPGR-208ENST00000482855 MYBL2P10244 700 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 KRT9P35527 623 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 CCDC70Q6NSX1 233 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
RPGR-208ENST00000482855 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 ATG9AQ7Z3C6 839 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPGR-208ENST00000482855 USP21Q9UK80 565 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
RPGR-208ENST00000482855 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 SH2B2O14492 632 aaPredicted RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 NDUFA10O95299 355 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 CDC25AP30304 524 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 PAPD7Q5XG87 772 aaKnown RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 JPH2Q9BR39 696 aaPredicted RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 A1CFQ9NQ94 594 aaKnown RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 BTBD18B2RXH4 712 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 ZBTB43O43298 467 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 OPA1O60313 960 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 IL15P40933 162 aaPredicted RBP12.42□□□□□ -0.42
RPGR-208ENST00000482855 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 OTUD6BQ8N6M0 293 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 GIMAP7Q8NHV1 300 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 JAKMIP2Q96AA8 810 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 C5P01031 1676 aa12.42□□□□□ -0.42
RPGR-208ENST00000482855 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 A6NNZ2 444 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 ATP5J2-PTCD1G3V325 749 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 NDUFAB1O14561 156 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 PTCD1O75127 700 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 AFMP43652 599 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 KRT31Q15323 416 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 EHBP1Q8NDI1 1231 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 SRPRBQ9Y5M8 271 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 SBF2Q86WG5 1849 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 RNF225M0QZC1 329 aaPredicted RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 DDR1Q08345 913 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 NTRK3Q16288 839 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 HSP90AB3PQ58FF7 597 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 CCDC122Q5T0U0 273 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 TTC19Q6DKK2 380 aaPredicted RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPGR-208ENST00000482855 SPATS2Q86XZ4 545 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 SMYD4Q8IYR2 804 aaPredicted RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 AENQ8WTP8 325 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPGR-208ENST00000482855 WASF1Q92558 559 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 CHP1Q99653 195 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 VPS16Q9H269 839 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 CEP131Q9UPN4 1083 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 REXO2Q9Y3B8 237 aaKnown RBP12.41□□□□□ -0.42
RPGR-208ENST00000482855 RREB1Q92766 1687 aa12.41□□□□□ -0.42
RPGR-208ENST00000482855 MYO1FO00160 1098 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 MMP1P03956 469 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
RPGR-208ENST00000482855 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
RPGR-208ENST00000482855 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 AMOTL1Q8IY63 956 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 APPBP2Q92624 585 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
RPGR-208ENST00000482855 LIMA1Q9UHB6 759 aaKnown RBP12.4□□□□□ -0.42
RPGR-208ENST00000482855 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 FSBPO95073 299 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 GPTP24298 496 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 FNTAP49354 379 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 SPAG1Q07617 926 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 SLC39A6Q13433 755 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 RUFY1Q96T51 708 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 QTRT2Q9H974 415 aaKnown RBP12.4□□□□□ -0.42
RPGR-208ENST00000482855 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
RPGR-208ENST00000482855 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 UBE2Q2LH0YL09 131 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 GPAA1O43292 621 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 COPB1P53618 953 aaKnown RBP12.39□□□□□ -0.43
RPGR-208ENST00000482855 ZNF790Q6PG37 636 aa12.39□□□□□ -0.43
RPGR-208ENST00000482855 GSDMAQ96QA5 445 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms