RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 GJA8P48165 433 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 COG2Q14746 738 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 SOCS4Q8WXH5 440 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 PORCNQ9H237 461 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 PLXNB2O15031 1838 aa18.34■□□□□ 0.53
EXOSC3-205ENST00000482614 PDE4DIPQ5VU43 2346 aa18.33■□□□□ 0.53
EXOSC3-205ENST00000482614 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 CAPN2P17655 700 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 PRPF38BQ5VTL8 546 aaKnown RBP18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 CLEC10AQ8IUN9 316 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 UNC93B1Q9H1C4 597 aa18.33■□□□□ 0.52
EXOSC3-205ENST00000482614 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 IGHDP01880 384 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 HMGCRP04035 888 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 CYP2B6P20813 491 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 RASA1P20936 1047 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 ZNF444Q8N0Y2 327 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
EXOSC3-205ENST00000482614 XRCC5P13010 732 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 CHD1LQ86WJ1 897 aa18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 TRMT44Q8IYL2 757 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 U2AF1L4Q8WU68 220 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 SHISA4Q96DD7 197 aa18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 NAPBQ9H115 298 aa18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 BRCA2P51587 3418 aa18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 GREB1LQ9C091 1923 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-205ENST00000482614 SGPL1O95470 568 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 SLC3A2P08195 630 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 DSG3P32926 999 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 RGS2P41220 211 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 MORN1Q5T089 497 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 SPICE1Q8N0Z3 855 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 MB21D1Q8N884 522 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 USP6NLQ92738 828 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
EXOSC3-205ENST00000482614 RLFQ13129 1914 aa18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 FLOT1O75955 427 aa18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 NUCB1Q02818 461 aa18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 PDE4BQ07343 736 aa18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 WDR78Q5VTH9 848 aa18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
EXOSC3-205ENST00000482614 RPTORQ8N122 1335 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 SLC15A5A6NIM6 579 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 TRIM6-TRIM34B2RNG4 842 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 PTPREP23469 700 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 PPARAQ07869 468 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 MAP2K5Q13163 448 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 TRIB2Q92519 343 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 DEFB118Q96PH6 123 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 IVNS1ABPQ9Y6Y0 642 aa18.28■□□□□ 0.52
EXOSC3-205ENST00000482614 PRDM1O75626 825 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 TFRCP02786 760 aaKnown RBP18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 SHCBP1Q8NEM2 672 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 APBA2Q99767 749 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 SPATC1LQ9H0A9 340 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.52
EXOSC3-205ENST00000482614 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 PARP14Q460N5 1801 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 RAD21O60216 631 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 TRIM32Q13049 653 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 ATG4CQ96DT6 458 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 CRISPLD2Q9H0B8 497 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
EXOSC3-205ENST00000482614 MYH4Q9Y623 1939 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 FOXP2O15409 715 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 STRNO43815 780 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 TSPY3P0CV98 308 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 TSPY8P0CW00 308 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 GRB14Q14449 540 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 ALX1Q15699 326 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 MAP3K21Q5TCX8 1036 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 UBE2Q1Q7Z7E8 422 aa18.25■□□□□ 0.51
EXOSC3-205ENST00000482614 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms