RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TOGARAM2Q6ZUX3 1019 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 ST7Q9NRC1 585 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 VPS54Q9P1Q0 977 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 COL1A1P02452 1464 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-220ENST00000482507 TUBB4AP04350 444 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 KRT222Q8N1A0 295 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
ATG4B-220ENST00000482507 COL24A1Q17RW2 1714 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 ARHGAP6O43182 974 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-220ENST00000482507 BAG1Q99933 345 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-220ENST00000482507 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-220ENST00000482507 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
ATG4B-220ENST00000482507 RTL9Q8NET4 1388 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 CCDC196A0A1B0GTZ2 297 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 CCP110O43303 1012 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 GYG1P46976 350 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 CLCN6P51797 869 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 EVX2Q03828 476 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 ARHGAP29Q52LW3 1261 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 ENAHQ8N8S7 591 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-220ENST00000482507 WDR24Q96S15 920 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
ATG4B-220ENST00000482507 URI1O94763 535 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
ATG4B-220ENST00000482507 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 RCAN1P53805 252 aa16.96■□□□□ 0.31
ATG4B-220ENST00000482507 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
ATG4B-220ENST00000482507 APTXQ7Z2E3 356 aaKnown RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 RIOK1Q9BRS2 568 aaKnown RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 RNF41Q9H4P4 317 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
ATG4B-220ENST00000482507 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF384Q8TF68 577 aa16.96■□□□□ 0.3
ATG4B-220ENST00000482507 DHX58Q96C10 678 aa16.96■□□□□ 0.3
ATG4B-220ENST00000482507 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.3
ATG4B-220ENST00000482507 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.3
ATG4B-220ENST00000482507 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 TADA3O75528 432 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 CHRNA5P30532 468 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 PLCD1P51178 756 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 GABPB1Q06547 395 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-220ENST00000482507 NR1I3Q14994 352 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 CARD6Q9BX69 1037 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 TEX33O43247 280 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 AFMP43652 599 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 GRAPQ13588 217 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 NPY5RQ15761 445 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 TRIML1Q8N9V2 468 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-220ENST00000482507 DESI2Q9BSY9 194 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 FHOD1Q9Y613 1164 aa16.95■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 ZSCAN12O43309 604 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 SRGNP10124 158 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 MTF1Q14872 753 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 ESR2Q92731 530 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 ZSCAN10Q96SZ4 725 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-220ENST00000482507 EPC1Q9H2F5 836 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATG4B-220ENST00000482507 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-220ENST00000482507 TRIM75PA6NK02 468 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 STX10O60499 249 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 KLRK1P26718 216 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■□□□ 11.6
ATG4B-220ENST00000482507 PAGE5Q96GU1 130 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
ATG4B-220ENST00000482507 CEP131Q9UPN4 1083 aa16.94■□□□□ 0.3
ATG4B-220ENST00000482507 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-220ENST00000482507 KIF20AO95235 890 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 STX17P56962 302 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 SMYD4Q8IYR2 804 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-220ENST00000482507 SYMPKQ92797 1274 aaKnown RBP16.93■□□□□ 0.3
ATG4B-220ENST00000482507 TNFRSF25Q93038 417 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 MYH6P13533 1939 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
ATG4B-220ENST00000482507 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 CUL4BQ13620 913 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 TERF2Q15554 542 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 GPR101Q96P66 508 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-220ENST00000482507 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-220ENST00000482507 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
ATG4B-220ENST00000482507 A0A0U1RQJ8 604 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms