RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 SIAH1Q8IUQ4 282 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 KLRG1Q96E93 195 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 KIF3AQ9Y496 699 aa14.57□□□□□ -0.08
IFT88-206ENST00000482172 PPP1R12BO60237 982 aaPredicted RBP14.56□□□□□ -0.08
IFT88-206ENST00000482172 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 RXRAP19793 462 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 SMARCA1P28370 1054 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 GJB2P29033 226 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 NF2P35240 595 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
IFT88-206ENST00000482172 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 RAB11FIP4Q86YS3 637 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 SCYL3Q8IZE3 742 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 GMCL1P1Q8NEA9 526 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 CDCA5Q96FF9 252 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 ARHGEF10LQ9HCE6 1279 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 CHMP5Q9NZZ3 219 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 STK36Q9NRP7 1315 aa14.56□□□□□ -0.08
IFT88-206ENST00000482172 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
IFT88-206ENST00000482172 USP2O75604 605 aaPredicted RBP14.55□□□□□ -0.08
IFT88-206ENST00000482172 PDCP20941 246 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 NUCB2P80303 420 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 SHROOM1Q2M3G4 852 aaPredicted RBP14.55□□□□□ -0.08
IFT88-206ENST00000482172 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 TMTC3Q6ZXV5 915 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 CLEC10AQ8IUN9 316 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.55□□□□□ -0.08
IFT88-206ENST00000482172 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
IFT88-206ENST00000482172 TMX2Q9Y320 296 aa14.55□□□□□ -0.08
IFT88-206ENST00000482172 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 JAK2O60674 1132 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 PDHBP11177 359 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 INPP5BP32019 993 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 IREB2P48200 963 aaKnown RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 SSRP1Q08945 709 aaKnown RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 MAP3K11Q16584 847 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 LRRC47Q8N1G4 583 aaKnown RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 FAM184AQ8NB25 1140 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 DCAF4Q8WV16 495 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 GLIS2Q9BZE0 524 aaPredicted RBP14.54□□□□□ -0.08
IFT88-206ENST00000482172 MAD2L2Q9UI95 211 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 ATAD5Q96QE3 1844 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 MYH4Q9Y623 1939 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 SRCAPQ6ZRS2 3230 aa14.54□□□□□ -0.08
IFT88-206ENST00000482172 DOCK1Q14185 1865 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 UNCXA6NJT0 531 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
IFT88-206ENST00000482172 FDPSP14324 419 aaKnown RBP14.53□□□□□ -0.08
IFT88-206ENST00000482172 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 FUT2Q10981 343 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 GPATCH4Q5T3I0 446 aaKnown RBP14.53□□□□□ -0.08
IFT88-206ENST00000482172 NBPF11Q86T75 865 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 WASF1Q92558 559 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 WDR18Q9BV38 432 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 GOPCQ9HD26 462 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 NMRK2Q9NPI5 230 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 PICK1Q9NRD5 415 aa14.53□□□□□ -0.08
IFT88-206ENST00000482172 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
IFT88-206ENST00000482172 ORC3Q9UBD5 711 aaPredicted RBP14.53□□□□□ -0.08
IFT88-206ENST00000482172 A0A1W2PRG0 241 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 F5H6K3 240 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 KLRC3Q07444 240 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 ZNF543Q08ER8 600 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 LARP1BQ659C4 914 aaKnown RBP14.52□□□□□ -0.09
IFT88-206ENST00000482172 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 PAPPA2Q9BXP8 1791 aa14.52□□□□□ -0.09
IFT88-206ENST00000482172 KLRF2D3W0D1 207 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 PLEKHA8P1O95397 391 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 DEXIO95424 95 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 PTPRAP18433 802 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 SYT1P21579 422 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 MAP1SQ66K74 1059 aaPredicted RBP14.51□□□□□ -0.09
IFT88-206ENST00000482172 USP17L2Q6R6M4 530 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 ARMC9Q7Z3E5 817 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 ANKRD13AQ8IZ07 590 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 STAG2Q8N3U4 1231 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
IFT88-206ENST00000482172 ACER1Q8TDN7 264 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 SLC26A6Q9BXS9 759 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 KIAA1683Q9H0B3 1180 aa14.51□□□□□ -0.09
IFT88-206ENST00000482172 VCPKMTQ9H867 229 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms