RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 PPIGQ13427 754 aaKnown RBP eCLIP9.45□□□□□ -0.9
USP54-213ENST00000481991 SNX17Q15036 470 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 OLFML2BQ68BL8 750 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 ZNF365Q70YC5 407 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 TMEM199Q8N511 208 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
USP54-213ENST00000481991 ZNF384Q8TF68 577 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 UIMC1Q96RL1 719 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 MOV10L1Q9BXT6 1211 aaKnown RBP9.45□□□□□ -0.9
USP54-213ENST00000481991 TANGO6Q9C0B7 1094 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 STARD7Q9NQZ5 370 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 HOXC10Q9NYD6 342 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 PHF24Q9UPV7 400 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 RFX7Q2KHR2 1363 aa9.45□□□□□ -0.9
USP54-213ENST00000481991 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 TCF20Q9UGU0 1960 aaKnown RBP9.44□□□□□ -0.9
USP54-213ENST00000481991 MYO9BQ13459 2157 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
USP54-213ENST00000481991 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
USP54-213ENST00000481991 BMP1P13497 986 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 CSF2RAP15509 400 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 VCAM1P19320 739 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 USP5P45974 858 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 COG2Q14746 738 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
USP54-213ENST00000481991 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 C1orf53Q5VUE5 145 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 ACER1Q8TDN7 264 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 NUP133Q8WUM0 1156 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 DNAJC18Q9H819 358 aa9.44□□□□□ -0.9
USP54-213ENST00000481991 DNAH12Q6ZR08 3092 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
USP54-213ENST00000481991 FGBP02675 491 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 FCER1AP12319 257 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 RAB30Q15771 203 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 KCNA10Q16322 511 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 MFSD5Q6N075 450 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 SPATC1LQ9H0A9 340 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
USP54-213ENST00000481991 HDAC5Q9UQL6 1122 aa9.43□□□□□ -0.9
USP54-213ENST00000481991 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 PTPRCP08575 1304 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 FLT1P17948 1338 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 RAD21O60216 631 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 PGK2P07205 417 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
USP54-213ENST00000481991 ACLYP53396 1101 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 RABGGTBP53611 331 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
USP54-213ENST00000481991 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 C16orf59Q7L2K0 433 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 OTOP2Q7RTS6 562 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
USP54-213ENST00000481991 MAML3Q96JK9 1138 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 MMP19Q99542 508 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 KIAA1683Q9H0B3 1180 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 MTIF3Q9H2K0 278 aaKnown RBP9.42□□□□□ -0.9
USP54-213ENST00000481991 CERS4Q9HA82 394 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 CNPY2Q9Y2B0 182 aa9.42□□□□□ -0.9
USP54-213ENST00000481991 LTBP2Q14767 1821 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 RFXAPO00287 272 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 TLR3O15455 904 aaKnown RBP9.41□□□□□ -0.9
USP54-213ENST00000481991 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
USP54-213ENST00000481991 PPP2R2DQ66LE6 453 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 C12orf42Q96LP6 360 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 TOX2Q96NM4 488 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 MROH8Q9H579 483 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 MRS2Q9HD23 443 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
USP54-213ENST00000481991 ATAD5Q96QE3 1844 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 PDS5AQ29RF7 1337 aaKnown RBP9.4□□□□□ -0.9
USP54-213ENST00000481991 SRGAP3O43295 1099 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 FLOT1O75955 427 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
USP54-213ENST00000481991 UQCRFS1P1P0C7P4 283 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 AKR1A1P14550 325 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 MYOGP15173 224 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 CYP7A1P22680 504 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 CYP2C18P33260 490 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 MCAMP43121 646 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP54-213ENST00000481991 KCTD2Q14681 263 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 SEPT2Q15019 361 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
USP54-213ENST00000481991 LBX2Q6XYB7 198 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 ANKRD33Q7Z3H0 272 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
USP54-213ENST00000481991 MIGA1Q8NAN2 632 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms